RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 OR4S2Q8NH73 311 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF721Q8TF20 911 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 MBD3L1Q8WWY6 194 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 HOXB13Q92826 284 aaPredicted RBP4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 EMG1Q92979 244 aaKnown RBP4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 TIFAQ96CG3 184 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 SMIM12Q96EX1 92 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 TECTBQ96PL2 329 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 OR8B4Q96RC9 309 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 P2RX4Q99571 388 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 PAAF1Q9BRP4 392 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 CABLES2Q9BTV7 478 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 CST9LQ9H4G1 147 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 UBE2ZQ9H832 354 aaPredicted RBP4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 Q9N2K0 584 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 GPR84Q9NQS5 396 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC13A4Q9UKG4 626 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 CDC42EP3Q9UKI2 254 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 TP53TG3Q9ULZ0 132 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 PIN4Q9Y237 131 aaKnown RBP4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 URGCP-MRPS24S4R325 110 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 CASP8AP2Q9UKL3 1982 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 CCDC88CQ9P219 2028 aa4.61□□□□□ -1.67
LSM3P2-201ENST00000551246 TRAV27A0A087WT01 109 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CENPVL1A0A0U1RR11 272 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 A0A1B0GTH9 108 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TMEM202A6NGA9 273 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 FOXI3A8MTJ6 420 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TMEM14DPA8MWL7 114 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 IFNL4K9M1U5 179 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 NUPR1O60356 82 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TNFSF15O95150 251 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CGAP01215 116 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 HBE1P02100 147 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MBPP02686 304 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 PCCBP05166 539 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 REG1AP05451 166 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 NGFRP08138 427 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MMP7P09237 267 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 GIMD1P0DJR0 217 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 IGLC2P0DOY2 106 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 IGLC3P0DOY3 106 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 BMP5P22003 454 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 HRH1P35367 487 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 SRP14P37108 136 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 PRLHRP49683 370 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 BLKP51451 505 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 YPEL3P61236 119 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 RHOAP61586 193 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 GNB2P62879 340 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 VAMP2P63027 116 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 LCN2P80188 198 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 RPL19P84098 196 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ROM1Q03395 351 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MFGE8Q08431 387 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 UNC119Q13432 240 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ENDOGQ14249 297 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 GPR18Q14330 331 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 IL13RA2Q14627 380 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC17A1Q14916 467 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TMEM183BQ1AE95 376 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC22A6Q4U2R8 563 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 KRTCAP3Q53RY4 240 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 LRRC73Q5JTD7 316 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 WDR38Q5JTN6 314 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 AGBL4Q5VU57 503 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 WDR25Q64LD2 544 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 SLC8B1Q6J4K2 584 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MFSD12Q6NUT3 480 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 VWA1Q6PCB0 445 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF66Q6ZN08 573 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ERN2Q76MJ5 926 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 RTN4RL1Q86UN2 441 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 APOBEC3FQ8IUX4 373 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MCEMP1Q8IX19 187 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CMTM1Q8IZ96 169 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 PNKDQ8N490 385 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 GVQW1Q8N7I0 195 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF615Q8N8J6 731 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 DCAF4L2Q8NA75 395 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF738Q8NE65 137 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 OR51A4Q8NGJ6 313 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 OR5D18Q8NGL1 313 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 OR2AJ1Q8NGZ0 328 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 OR4K13Q8NH42 304 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 OR51A7Q8NH64 312 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF519Q8TB69 540 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CPT1CQ8TCG5 803 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZPLD1Q8TCW7 415 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 RPUSD4Q96CM3 377 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZNF689Q96CS4 500 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 CNRIP1Q96F85 164 aaPredicted RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 PGAM5Q96HS1 289 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 MS4A10Q96PG2 267 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ALG12Q9BV10 488 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 TTTY10Q9BZA0 68 aa4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 PARP12Q9H0J9 701 aaKnown RBP4.6□□□□□ -1.67
LSM3P2-201ENST00000551246 ZBP1Q9H171 429 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms