RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 ZNF714Q96N38 554 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 PAPOLBQ9NRJ5 636 aaKnown RBP10.34□□□□□ -0.75
PTCH1-221ENST00000550914 AURKAIP1Q9NWT8 199 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-221ENST00000550914 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-221ENST00000550914 SLC7A11Q9UPY5 501 aa10.34□□□□□ -0.75
PTCH1-221ENST00000550914 hADV38S2A0JD32 116 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 FAM90A22PA8MWA6 464 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 F2RL2O00254 374 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 DNAJC8O75937 253 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-221ENST00000550914 VDAC2P45880 294 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-221ENST00000550914 EDDM3BP56851 147 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 CD83Q01151 205 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 DYNC1I2Q13409 638 aaKnown RBP10.33□□□□□ -0.76
PTCH1-221ENST00000550914 ARSJQ5FYB0 599 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-221ENST00000550914 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 MEPCEQ7L2J0 689 aaKnown RBP10.33□□□□□ -0.76
PTCH1-221ENST00000550914 C16orf82Q7Z2V1 217 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 ANGPTL5Q86XS5 388 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 CCDC54Q8NEL0 328 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 SNX22Q96L94 193 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 CEP19Q96LK0 163 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 APOL4Q9BPW4 351 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 TTTY10Q9BZA0 68 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 CLN6Q9NWW5 311 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 GTF2A1LQ9UNN4 478 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
PTCH1-221ENST00000550914 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ZNF670-ZNF695F2Z2N8 137 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 PRKYO43930 277 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 GATBO75879 557 aaKnown RBP10.32□□□□□ -0.76
PTCH1-221ENST00000550914 CD33P20138 364 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 FUT6P51993 359 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ACTA2P62736 377 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 BLCAPP62952 87 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ACTG2P63267 376 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ACTC1P68032 377 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ACTA1P68133 377 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 CBX1P83916 185 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 EFNB1P98172 346 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 IL18R1Q13478 541 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 PTGES3Q15185 160 aaKnown RBP10.32□□□□□ -0.76
PTCH1-221ENST00000550914 FOXB2Q5VYV0 432 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 SLX4IPQ5VYV7 408 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 NXNL2Q5VZ03 156 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 FAHD1Q6P587 224 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 TCF23Q7RTU1 214 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 SLC35F2Q8IXU6 374 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 Q8IYB0 196 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ENTHD1Q8IYW4 607 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 THTPAQ9BU02 230 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 PLEKHA1Q9HB21 404 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 ADGRL4Q9HBW9 690 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 MTCH1Q9NZJ7 389 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-221ENST00000550914 MRM2Q9UI43 246 aaKnown RBP10.32□□□□□ -0.76
PTCH1-221ENST00000550914 SESN1Q9Y6P5 492 aa10.32□□□□□ -0.76
PTCH1-221ENST00000550914 IGHV2-26A0A0B4J1V2 119 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 FAM230AA0A1W2PPH8 454 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 F8VVB4 439 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 F8VWA3 439 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 FKBP6O75344 327 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 PEX2P28328 305 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 GYS2P54840 703 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 SLC34A1Q06495 639 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 AADACL4Q5VUY2 407 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 Q6ZS46 218 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 GID4Q8IVV7 300 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 BATF2Q8N1L9 274 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 ZNF676Q8N7Q3 588 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 OR5AU1Q8NGC0 362 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 TMEM163Q8TC26 289 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 C10orf35Q96D05 121 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 AKR1E2Q96JD6 320 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 OR5M11Q96RB7 305 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 CLEC7AQ9BXN2 247 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 CADM1Q9BY67 442 aaKnown RBP10.31□□□□□ -0.76
PTCH1-221ENST00000550914 CHST5Q9GZS9 411 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 TMEM133Q9H2Q1 129 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 LIN7BQ9HAP6 207 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 HILPDAQ9Y5L2 63 aa10.31□□□□□ -0.76
PTCH1-221ENST00000550914 IGKV1-27A0A075B6S5 117 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 TCRBV3S1A0A5B6 114 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 A6NIN4 97 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 MAGEB4O15481 346 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-221ENST00000550914 FAM107AO95990 144 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 KRT8P05787 483 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 PF4V1P10720 104 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 HTR1DP28221 377 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 ERP29P30040 261 aaKnown RBP10.3□□□□□ -0.76
PTCH1-221ENST00000550914 FLOT2Q14254 428 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 UBE2V2Q15819 145 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 PLEKHG7Q6ZR37 379 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 SPATA24Q86W54 205 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 CATSPERDQ86XM0 798 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 EGFL6Q8IUX8 553 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 NDNFQ8TB73 568 aa10.3□□□□□ -0.76
PTCH1-221ENST00000550914 TRMT10AQ8TBZ6 339 aaKnown RBP10.3□□□□□ -0.76
PTCH1-221ENST00000550914 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms