RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 DUX5Q96PT3 197 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 PDCD1LG2Q9BQ51 273 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 MTCH1Q9NZJ7 389 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 SOX21Q9Y651 276 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 FBN3Q75N90 2809 aa14.18□□□□□ -0.14
CHMP1A-208ENST00000550102 CLDN34H7C241 214 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 MT-ND2P03891 347 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 GUCA2AQ02747 115 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 BLMHQ13867 455 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 CCDC58Q4VC31 144 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 FIP1L1Q6UN15 594 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 ASCC1Q8N9N2 400 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 GCDHQ92947 438 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 EMG1Q92979 244 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 FAM234AQ9H0X4 552 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 ZCCHC4Q9H5U6 513 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 SIRT7Q9NRC8 400 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 DHDHQ9UQ10 334 aa14.17□□□□□ -0.14
CHMP1A-208ENST00000550102 EFCAB10A6NFE3 127 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 F8VVB4 439 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 F8VWA3 439 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 RNASE1P07998 156 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 CDK5R1Q15078 307 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 OR2G6Q5TZ20 316 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 NCR3LG1Q68D85 454 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 RPL22L1Q6P5R6 122 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 C12orf54Q6X4T0 127 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 C1orf122Q6ZSJ8 110 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 PARP16Q8N5Y8 322 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 Q8N7P7 452 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 TMEM80Q96HE8 168 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 PRDM13Q9H4Q3 707 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 METTL8Q9H825 291 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 NOX4Q9NPH5 578 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 C19orf12Q9NSK7 152 aa14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 CHCHD3Q9NX63 227 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-208ENST00000550102 A0A1W2PPH5 198 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 SULT1B1O43704 296 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 INMTO95050 263 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 TK1P04183 234 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 HCKP08631 526 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 PIPP12273 146 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 GTF2A1P52655 376 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 RPL31P62899 125 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 COL10A1Q03692 680 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 SLC34A1Q06495 639 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 PDZK1IP1Q13113 114 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 SLC9A3R2Q15599 337 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 XAF1Q6GPH4 301 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 SERPINA12Q8IW75 414 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 PDZD9Q8IXQ8 264 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 OR5D14Q8NGL3 314 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 OR52N1Q8NH53 320 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 RPS4Y2Q8TD47 263 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 GPR148Q8TDV2 347 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 RFT1Q96AA3 541 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 SPACA5Q96QH8 159 aa14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 UNKLQ9H9P5 680 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 RBFOX1Q9NWB1 397 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 CNOT2Q9NZN8 540 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 NKX1-2Q9UD57 310 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-208ENST00000550102 TMEM89A2RUT3 159 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 ERICH4A6NGS2 130 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 K7N7A8 449 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 HOXA3O43365 443 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 SPRY1O43609 319 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 CD2P06729 351 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 CHRM2P08172 466 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 BCL3P20749 454 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 EEF1B2P24534 225 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 COMPP49747 757 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 ST3GAL4Q11206 333 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 KLRD1Q13241 179 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 SPIN3Q5JUX0 258 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 FAM58AQ8N1B3 248 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 OR5D13Q8NGL4 314 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 TBC1D15Q8TC07 691 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 FBLIM1Q8WUP2 373 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 RGP1Q92546 391 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 SMIM19Q96E16 107 aa14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 CPNE2Q96FN4 548 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-208ENST00000550102 A0A0U1RQK1 487 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 RNASEK-C17orf49H0YIS7 233 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 ZNF737O75373 536 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 ALX3O95076 343 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 HAND1O96004 215 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 PRKACAP17612 351 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 NPBWR2P48146 333 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 Q6YL49 198 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 AHSA2Q719I0 299 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 SAXO1Q8IYX7 474 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 OR8H2Q8N162 312 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 PIP4P2Q8N4L2 257 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 OR5D18Q8NGL1 313 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 SSMEM1Q8WWF3 244 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 GGHQ92820 318 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 BABAM2Q9NXR7 383 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 IL36RNQ9UBH0 155 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 CLEC2DQ9UHP7 191 aa14.13□□□□□ -0.15
CHMP1A-208ENST00000550102 FAM96BQ9Y3D0 163 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms