RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ZNF561Q8N587 486 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 OR52N4Q8NGI2 321 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 GAFA1Q96PS6 74 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 MMP26Q9NRE1 261 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 SF3B6Q9Y3B4 125 aaKnown RBP12.02□□□□□ -0.49
DDX54-203ENST00000546869 MAB21L2Q9Y586 359 aa12.02□□□□□ -0.49
DDX54-203ENST00000546869 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 IGKV1-12A0A0C4DH73 117 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 MEGF11A6BM72 1044 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 RFPL4AA6NLU0 287 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 RFPL4AL1F8VTS6 287 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 F8VVB4 439 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 F8VWA3 439 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 SPRY1O43609 319 aaPredicted RBP12.01□□□□□ -0.49
DDX54-203ENST00000546869 FCN3O75636 299 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 IGKV1D-12P01611 117 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 UCHL1P09936 223 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 CD37P11049 281 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 HNF1AP20823 631 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 GABRA5P31644 462 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
DDX54-203ENST00000546869 POU3F4P49335 361 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 GMFBP60983 142 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 SPIN3Q5JUX0 258 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 FAHD2BQ6P2I3 314 aaPredicted RBP12.01□□□□□ -0.49
DDX54-203ENST00000546869 RNF144BQ7Z419 303 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 LYPD6Q86Y78 171 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 FAHD2AQ96GK7 314 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 SPACA5Q96QH8 159 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 TMED9Q9BVK6 235 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 TMPRSS13Q9BYE2 586 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 FAM234AQ9H0X4 552 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 SMURF1Q9HCE7 757 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 HMG20AQ9NP66 347 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 NOX4Q9NPH5 578 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
DDX54-203ENST00000546869 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
DDX54-203ENST00000546869 GABRPO00591 440 aa12□□□□□ -0.49
DDX54-203ENST00000546869 ENSAO43768 121 aaKnown RBP12□□□□□ -0.49
DDX54-203ENST00000546869 PLATP00750 562 aa12□□□□□ -0.49
DDX54-203ENST00000546869 CHRM2P08172 466 aa12□□□□□ -0.49
DDX54-203ENST00000546869 TMEM225BP0DP42 221 aa12□□□□□ -0.49
DDX54-203ENST00000546869 BCL3P20749 454 aa12□□□□□ -0.49
DDX54-203ENST00000546869 GALP22466 123 aa12□□□□□ -0.49
DDX54-203ENST00000546869 PTGFRP43088 359 aa12□□□□□ -0.49
DDX54-203ENST00000546869 NPBWR2P48146 333 aa12□□□□□ -0.49
DDX54-203ENST00000546869 GP2P55259 537 aaKnown RBP12□□□□□ -0.49
DDX54-203ENST00000546869 DGUOKQ16854 277 aa12□□□□□ -0.49
DDX54-203ENST00000546869 CHRFAM7AQ494W8 412 aa12□□□□□ -0.49
DDX54-203ENST00000546869 ARMCX4Q5H9R4 360 aa12□□□□□ -0.49
DDX54-203ENST00000546869 DDI2Q5TDH0 399 aa12□□□□□ -0.49
DDX54-203ENST00000546869 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
DDX54-203ENST00000546869 BTNL3Q6UXE8 466 aa12□□□□□ -0.49
DDX54-203ENST00000546869 TMEM91Q6ZNR0 172 aa12□□□□□ -0.49
DDX54-203ENST00000546869 CEACAM19Q7Z692 300 aa12□□□□□ -0.49
DDX54-203ENST00000546869 CD177Q8N6Q3 437 aa12□□□□□ -0.49
DDX54-203ENST00000546869 FAM216BQ8N7L0 139 aa12□□□□□ -0.49
DDX54-203ENST00000546869 NKAIN3Q8N8D7 197 aa12□□□□□ -0.49
DDX54-203ENST00000546869 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
DDX54-203ENST00000546869 LY6G5BQ8NDX9 201 aa12□□□□□ -0.49
DDX54-203ENST00000546869 C8orf46Q8TAG6 207 aa12□□□□□ -0.49
DDX54-203ENST00000546869 ORAI1Q96D31 301 aa12□□□□□ -0.49
DDX54-203ENST00000546869 GPER1Q99527 375 aa12□□□□□ -0.49
DDX54-203ENST00000546869 BEX2Q9BXY8 128 aa12□□□□□ -0.49
DDX54-203ENST00000546869 NDUFB11Q9NX14 153 aa12□□□□□ -0.49
DDX54-203ENST00000546869 IL36GQ9NZH8 169 aa12□□□□□ -0.49
DDX54-203ENST00000546869 FN1P02751 2386 aaKnown RBP12□□□□□ -0.49
DDX54-203ENST00000546869 A0A1B0GW55 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 A0A1W2PPK0 400 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 C22orf46C9J442 243 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 ANGPTL7O43827 346 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 ZNF780AO75290 641 aaPredicted RBP11.99□□□□□ -0.49
DDX54-203ENST00000546869 TNFAIP8O95379 198 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 SFTPBP07988 381 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L2P0CJ85 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L3P0CJ86 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L4P0CJ87 422 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L5P0CJ88 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L6P0CJ89 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L7P0CJ90 424 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 SRMP19623 302 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 LMO1P25800 156 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 GABRA2P47869 451 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 MTNR1BP49286 362 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 SSX1Q16384 188 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 CD200R1LQ6Q8B3 271 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DUX4L9Q6RFH8 374 aaPredicted RBP11.99□□□□□ -0.49
DDX54-203ENST00000546869 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 ZNRF1Q8ND25 227 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
DDX54-203ENST00000546869 RFT1Q96AA3 541 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 FOXRED1Q96CU9 486 aaPredicted RBP11.99□□□□□ -0.49
DDX54-203ENST00000546869 NUDT16L1Q9BRJ7 211 aaKnown RBP11.99□□□□□ -0.49
DDX54-203ENST00000546869 UQCC2Q9BRT2 126 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
DDX54-203ENST00000546869 C7orf69Q9H7B7 122 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms