RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PAX5Q02548 391 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF542PQ5EBM4 170 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 TRIM61Q5EBN2 209 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 RABEPKQ7Z6M1 372 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 MYPOPQ86VE0 399 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 ZDHHC23Q8IYP9 409 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 NOXO1Q8NFA2 376 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 OR10G4Q8NGN3 311 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 OR10G9Q8NGN4 311 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 OR10G7Q8NGN6 311 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 C11orf40Q8WZ69 217 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 GAS2L1Q99501 681 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
PTCH1-212ENST00000546744 HIF1ANQ9NWT6 349 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 NPTNQ9Y639 398 aa11.41□□□□□ -0.58
PTCH1-212ENST00000546744 CTXND1A0A1B0GTU2 59 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TCF21O43680 179 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TIMP1P01033 207 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF468Q5VIY5 522 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TRAT1Q6PIZ9 186 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 Q6ZNB5 142 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF683Q8IZ20 524 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 OR11H4Q8NGC9 324 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 SMIM12Q96EX1 92 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TOX2Q96NM4 488 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 S1PR3Q99500 378 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 DOK5Q9P104 306 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 NAGKQ9UJ70 344 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 ICAM5Q9UMF0 924 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 CDC42EP2O14613 210 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 YIF1AO95070 293 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 CD82P27701 267 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 FCER1GP30273 86 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 DCDP81605 110 aaKnown RBP11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TBC1D28Q2M2D7 210 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 ASB16Q96NS5 453 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 UTP23Q9BRU9 249 aaKnown RBP11.4□□□□□ -0.58
PTCH1-212ENST00000546744 GGACTQ9BVM4 153 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 HCSTQ9UBK5 93 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 ADAM20O43506 726 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
PTCH1-212ENST00000546744 CBR3O75828 277 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 CEBPBP17676 345 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 OR3A1P47881 315 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 EMDP50402 254 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 CLEC12BQ2HXU8 276 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 C20orf196Q8IYI0 205 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 SPACA5Q96QH8 159 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 DCAF16Q9NXF7 216 aa11.4□□□□□ -0.58
PTCH1-212ENST00000546744 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
PTCH1-212ENST00000546744 H3BNC9 293 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 SIAH2O43255 324 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 BCL2P10415 239 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 LIMS1P48059 325 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 HIST3H3Q16695 136 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 TMEFF1Q8IYR6 380 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 IL21Q9HBE4 155 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 OR5AC2Q9NZP5 309 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 HSPB6O14558 160 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 GEMIN2O14893 280 aaKnown RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 HAND1O96004 215 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 DAOP14920 347 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 TSEN54Q7Z6J9 526 aaKnown RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 TRMT61AQ96FX7 289 aaKnown RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 FUT9Q9Y231 359 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 SYNGR2O43760 224 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 ZBTB25P24278 435 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 CD38P28907 300 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 GJA4P35212 333 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 ARL16Q0P5N6 197 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 RUNX2Q13950 521 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 HFEQ30201 348 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 SLC25A26Q70HW3 274 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 GUSBP08236 651 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 RPS27P42677 84 aaKnown RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 BHLHA9Q7RTU4 235 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 SDHCQ99643 169 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 SLC2A8Q9NY64 477 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 WSB2Q9NYS7 404 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-212ENST00000546744 CDC42EP3Q9UKI2 254 aa11.39□□□□□ -0.59
PTCH1-212ENST00000546744 GPR37O15354 613 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 NXPH3O95157 252 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 IFI6P09912 130 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 GLB1P16278 677 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 CHRNA7P36544 502 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 CSRP3P50461 194 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 KCNE4Q8WWG9 221 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 CLDN23Q96B33 292 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 FAAP24Q9BTP7 215 aa11.38□□□□□ -0.59
PTCH1-212ENST00000546744 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms