RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF222Q9UK12 451 aa13.6□□□□□ -0.23
LIMS2-217ENST00000545738 A0A0B4J203 849 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 PSG2P11465 335 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 SLC25A16P16260 332 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MDH2P40926 338 aaKnown RBP13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MXD1Q05195 221 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 C1orf100Q5SVJ3 147 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 PXT1Q8NFP0 134 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 ANGPTL6Q8NI99 470 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 RAB1CQ92928 201 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 KCTD7Q96MP8 289 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 NLKQ9UBE8 527 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 ABCA1O95477 2261 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 DOCK11Q5JSL3 2073 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MEGF11A6BM72 1044 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 H7C1Q1 480 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 SLC22A1O15245 554 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 NXPH2O95156 264 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 FSTL3O95633 263 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 DUSP1P28562 367 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MTNR1BP49286 362 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 SNU13P55769 128 aaKnown RBP13.59□□□□□ -0.23
LIMS2-217ENST00000545738 PLA2G7Q13093 441 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 OR10K2Q6IF99 312 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 GLIPR1L1Q6UWM5 242 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MKXQ8IYA7 352 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 CD177Q8N6Q3 437 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 ZSCAN4Q8NAM6 433 aaPredicted RBP13.59□□□□□ -0.23
LIMS2-217ENST00000545738 TMEM104Q8NE00 496 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 TIMD4Q96H15 378 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 UQCC2Q9BRT2 126 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 SLITRK2Q9H156 845 aa13.59□□□□□ -0.23
LIMS2-217ENST00000545738 MRPS28Q9Y2Q9 187 aaKnown RBP13.59□□□□□ -0.23
LIMS2-217ENST00000545738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.58□□□□□ -0.24
LIMS2-217ENST00000545738 F8P00451 2351 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 OR2AT4A6NND4 320 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 IGHV2-5P01817 119 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 SLC2A2P11168 524 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-217ENST00000545738 RAB3BP20337 219 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 MYL9P24844 172 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 PDCD1Q15116 288 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 TMEM155Q4W5P6 130 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 HES5Q5TA89 166 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 AWAT2Q6E213 333 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 SPNS3Q6ZMD2 512 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 GDPGP1Q6ZNW5 385 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 PEG10Q86TG7 708 aaKnown RBP13.58□□□□□ -0.24
LIMS2-217ENST00000545738 CLVS1Q8IUQ0 354 aaPredicted RBP13.58□□□□□ -0.24
LIMS2-217ENST00000545738 CDH26Q8IXH8 852 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 SAXO1Q8IYX7 474 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 FAM216BQ8N7L0 139 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 Q8NFD4 153 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 CCL13Q99616 98 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 GAL3ST1Q99999 423 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 HMG20AQ9NP66 347 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 GSTK1Q9Y2Q3 226 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 V9GY05 133 aa13.58□□□□□ -0.24
LIMS2-217ENST00000545738 RFPL4AA6NLU0 287 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 FAM157AC9JC47 383 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 RFPL4AL1F8VTS6 287 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 TRAPPC2LH3BP13 241 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 SLC17A2O00624 439 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 MUC1P15941 1255 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-217ENST00000545738 PRKACAP17612 351 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 SERPINA2P20848 420 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 USF1P22415 310 aaPredicted RBP13.57□□□□□ -0.24
LIMS2-217ENST00000545738 RPS19P39019 145 aaKnown RBP13.57□□□□□ -0.24
LIMS2-217ENST00000545738 QRFPP83859 136 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 UNC119Q13432 240 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 P2RY14Q15391 338 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 MICBQ29980 383 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 PIGYQ3MUY2 71 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 TIMM50Q3ZCQ8 353 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 SLC22A6Q4U2R8 563 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 FAM58AQ8N1B3 248 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 EMG1Q92979 244 aaKnown RBP13.57□□□□□ -0.24
LIMS2-217ENST00000545738 GAFA1Q96PS6 74 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 RBM38Q9H0Z9 239 aaKnown RBP13.57□□□□□ -0.24
LIMS2-217ENST00000545738 DNAJB11Q9UBS4 358 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 MAB21L2Q9Y586 359 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 CEPT1Q9Y6K0 416 aa13.57□□□□□ -0.24
LIMS2-217ENST00000545738 TRAV38-1A0A0B4J264 116 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 IFITM5A6NNB3 132 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 F5H0A9 414 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 VSIG8P0DPA2 414 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 HTR2CP28335 458 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 LOXL1Q08397 574 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 ELP2Q6IA86 826 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 PNLDC1Q8NA58 520 aaKnown RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 NDNFQ8TB73 568 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 ELL3Q9HB65 397 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 IL36GQ9NZH8 169 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 WNT2P09544 360 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 CFPP27918 469 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 FGF12P61328 243 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 BLMHQ13867 455 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms