RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 A0A1W2PPZ6 126 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 MSGN1A6NI15 193 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 RPL36A-HNRNPH2H7BZ11 118 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 RAB32Q13637 225 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 DHRS11Q6UWP2 260 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 LOXL4Q96JB6 756 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 ACKR4Q9NPB9 350 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 CYTL1Q9NRR1 136 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 C1orf123Q9NWV4 160 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 CRYM-AS1A6NIL9 109 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 ZNF850A8MQ14 1090 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 RBMXP38159 391 aaKnown RBP15.58■□□□□ 0.08
VIM-209ENST00000544301 ELP2Q6IA86 826 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 SGPP2Q8IWX5 399 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 TMEM251Q8N6I4 163 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 GSKIPQ9P0R6 139 aa15.58■□□□□ 0.08
VIM-209ENST00000544301 TPT1P13693 172 aaKnown RBP15.57■□□□□ 0.08
VIM-209ENST00000544301 FOXG1P55316 489 aaPredicted RBP15.57■□□□□ 0.08
VIM-209ENST00000544301 NAAAQ02083 359 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 RBM39Q14498 530 aaKnown RBP15.57■□□□□ 0.08
VIM-209ENST00000544301 STK11Q15831 433 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 CALHM1Q8IU99 346 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 FAM219AQ8IW50 185 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 FNDC9Q8TBE3 224 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 IL17BQ9UHF5 180 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 KMT2EQ8IZD2 1858 aa15.57■□□□□ 0.08
VIM-209ENST00000544301 HLA-HP01893 362 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 SLC30A7Q8NEW0 376 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 MARS2Q96GW9 593 aaKnown RBP15.56■□□□□ 0.08
VIM-209ENST00000544301 AQP10Q96PS8 301 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 PCDHB16Q9NRJ7 776 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 TAS2R3Q9NYW6 316 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 FAM221AA4D161 298 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 PDCD6O75340 191 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 PET100P0DJ07 73 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 RBM11P57052 281 aaKnown RBP15.56■□□□□ 0.08
VIM-209ENST00000544301 PLGLB1Q02325 96 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 AIMP2Q13155 320 aaKnown RBP15.56■□□□□ 0.08
VIM-209ENST00000544301 PDCD1Q15116 288 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 BAP18Q8IXM2 172 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 MS4A7Q9GZW8 240 aaPredicted RBP15.56■□□□□ 0.08
VIM-209ENST00000544301 NCOR1O75376 2440 aa15.56■□□□□ 0.08
VIM-209ENST00000544301 FREM1Q5H8C1 2179 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNHIT1O43257 154 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNF205O95201 554 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 CCNOP22674 350 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 MALLQ13021 153 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 SLC25A26Q70HW3 274 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNF611Q8N823 705 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 REPIN1Q9BWE0 567 aaKnown RBP15.55■□□□□ 0.08
VIM-209ENST00000544301 PRRG4Q9BZD6 226 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 DNAJB11Q9UBS4 358 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 MEMO1Q9Y316 297 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 C5orf49A4QMS7 147 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNF503-AS2A6NEH8 195 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNF724A8MTY0 619 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 FGF16O43320 207 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 ZNF728P0DKX0 622 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 CCL2P13500 99 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 S100A10P60903 97 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 DAZAP2Q15038 168 aaPredicted RBP15.55■□□□□ 0.08
VIM-209ENST00000544301 SLC22A25Q6T423 547 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 DHRS13Q6UX07 377 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 OR56B2PQ8NGI1 322 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 TOMM40LQ969M1 308 aa15.55■□□□□ 0.08
VIM-209ENST00000544301 LOC105371267A0A1B0GV96 52 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 COX5BP10606 129 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 NPBWR2P48146 333 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 PIGPP57054 158 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 IAH1Q2TAA2 248 aaPredicted RBP15.54■□□□□ 0.08
VIM-209ENST00000544301 PAPOLGQ9BWT3 736 aaKnown RBP15.54■□□□□ 0.08
VIM-209ENST00000544301 RNF122Q9H9V4 155 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 ZNF286AQ9HBT8 521 aa15.54■□□□□ 0.08
VIM-209ENST00000544301 PQLC2LA1A4F0 135 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 SP1P08047 785 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 FUT3P21217 361 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 MEOX1P50221 254 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 BTN1A1Q13410 526 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 ZNF585AQ6P3V2 769 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 Q6ZPA2 131 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 BATF2Q8N1L9 274 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 OR1S2Q8NGQ3 325 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 APH1AQ96BI3 265 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 SLC5A7Q9GZV3 580 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 FGF23Q9GZV9 251 aaPredicted RBP15.53■□□□□ 0.08
VIM-209ENST00000544301 TMEM100Q9NV29 134 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 CRIM1Q9NZV1 1036 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 PCDHB10Q9UN67 800 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 TNFSF15O95150 251 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 CD79AP11912 226 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 PRDX4Q13162 271 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 C3AR1Q16581 482 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 TMEM211Q6ICI0 200 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 Q8NFD4 153 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 MRPL24Q96A35 216 aaKnown RBP15.53■□□□□ 0.08
VIM-209ENST00000544301 CNTNAP3BQ96NU0 1288 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 CNTNAP3Q9BZ76 1288 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 PIGMQ9H3S5 423 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 C12orf4Q9NQ89 552 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms