RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	ADAD2	Q8NCV1	583 aa	Known RBP	13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	OR5D18	Q8NGL1	313 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	NTNG2	Q96CW9	530 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	SGCZ	Q96LD1	299 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	DLL3	Q9NYJ7	618 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	PRR13	Q9NZ81	148 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268		A0A0G2JMM0	328 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268		A0A1W2PPB8	328 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268		A0A1W2PRS3	328 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	KIR3DP1	A8MWS1	328 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	IL2RA	P01589	272 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	ADH6	P28332	368 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	HRH1	P35367	487 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF121	P58317	390 aa	Predicted RBP	13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	AWAT1	Q58HT5	328 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	PHYHD1	Q5SRE7	291 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	DNLZ	Q5SXM8	178 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	NSUN5P2	Q63ZY6	315 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	OR8B12	Q8NGG6	310 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	AQP3	Q92482	292 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	JSRP1	Q96MG2	331 aa	Predicted RBP	13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	PHB2	Q99623	299 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	CST11	Q9H112	138 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	GAR1	Q9NY12	217 aa	Known RBP	13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	B3GALT5	Q9Y2C3	310 aa		13.11	□□□□□ -0.31
CHFR-223	ENST00000544268	IFITM10	A6NMD0	228 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	YIF1A	O95070	293 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	IFNA2	P01563	188 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	PMP2	P02689	132 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	QDPR	P09417	244 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	LIF	P15018	202 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	RAB4A	P20338	218 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	NME2	P22392	152 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	BTNL8	Q6UX41	500 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	TMPRSS7	Q7RTY8	843 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF584	Q8IVC4	421 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	NOXO1	Q8NFA2	376 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	OR10J5	Q8NHC4	309 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	C2orf88	Q9BSF0	95 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	GPR84	Q9NQS5	396 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	SOCS1	O15524	211 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	HCK	P08631	526 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	MAS1L	P35410	378 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	LPAR6	P43657	344 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	SRSF6	Q13247	344 aa	Known RBP	13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	PPP1R1A	Q13522	171 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	CDPF1	Q6NVV7	123 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	KLHL24	Q6TFL4	600 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	VASH2	Q86V25	355 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	FAM24B	Q8N5W8	94 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	IP6K3	Q96PC2	410 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	RNF126	Q9BV68	326 aa		13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.1	□□□□□ -0.31
CHFR-223	ENST00000544268	HSD11B1	P28845	292 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	DDT	P30046	118 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	EIF5AL1	Q6IS14	154 aa	Known RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF585A	Q6P3V2	769 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	FAM57B	Q71RH2	274 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF101	Q8IZC7	436 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	OR56B1	Q8NGI3	324 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	CASTOR1	Q8WTX7	329 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	S100PBP	Q96BU1	408 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	RRNAD1	Q96FB5	475 aa	Known RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	UCN2	Q96RP3	112 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	SLCO5A1	Q9H2Y9	848 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	PNRC2	Q9NPJ4	139 aa	Known RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268		P04436	131 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF93	P35789	620 aa	Predicted RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	CYB561	P49447	251 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	CD81	P60033	236 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	PKIA	P61925	76 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	IL13RA1	P78552	427 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	CLN3	Q13286	438 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	PLAC9	Q5JTB6	97 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	SAPCD1	Q5SSQ6	148 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	OR5AS1	Q8N127	324 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	MAFIP	Q8WZ33	124 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	THRSP	Q92748	146 aa		13.09	□□□□□ -0.31
CHFR-223	ENST00000544268	ZNF107	Q9UII5	783 aa	Predicted RBP	13.09	□□□□□ -0.31
CHFR-223	ENST00000544268		A0A1W2PNV4	684 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	MED6	O75586	246 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	RAD51D	O75771	328 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	IGHG1	P01857	330 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	PI3	P19957	117 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	CLDN17	P56750	224 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	KIAA0141	Q14154	515 aa	Predicted RBP	13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	GLIPR1L1	Q6UWM5	242 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	C1QL2	Q7Z5L3	287 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	TGIF2LX	Q8IUE1	241 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	LRRC18	Q8N456	261 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	SECTM1	Q8WVN6	248 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	ZNF837	Q96EG3	531 aa	Predicted RBP	13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	PIGQ	Q9BRB3	760 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	NMES1	Q9C002	83 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	RGCC	Q9H4X1	137 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	SPTBN2	O15020	2390 aa		13.08	□□□□□ -0.32
CHFR-223	ENST00000544268	MEGF11	A6BM72	1044 aa		13.08	□□□□□ -0.32

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