RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TCTAP57738 103 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CNIH2Q6PI25 160 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RASL11AQ6T310 242 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 C6orf120Q7Z4R8 191 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 ACOT1Q86TX2 421 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 C10orf111Q8N326 155 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF439Q8NDP4 499 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 KLHDC7BQ96G42 594 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SMIM10Q96HG1 83 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SH2D2AQ9NP31 389 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 MRPS18AQ9NVS2 196 aaKnown RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 R4GN57 208 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RALGAPA2Q2PPJ7 1873 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR4C45A6NMZ5 311 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 FTCDNL1E5RQL4 147 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR5AC1P0C628 307 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 HIST1H1EP10412 219 aaKnown RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 LSSP48449 732 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CPSF6Q16630 551 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SYPL2Q5VXT5 272 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 C17orf64Q86WR6 236 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF761Q86XN6 746 aaPredicted RBP7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RNF149Q8NC42 400 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 OR1J1Q8NGS3 322 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 IL17DQ8TAD2 202 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 VN1R17PQ8TDU5 208 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 SECTM1Q8WVN6 248 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 MOB3AQ96BX8 217 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 KCTD7Q96MP8 289 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 RCHY1Q96PM5 261 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 CWH43Q9H720 699 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 TAS2R16Q9NYV7 291 aa7.83□□□□□ -1.16
VPS13D-212ENST00000543766 A6NIN4 97 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR5B21A6NL26 309 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 EEF1E1O43324 174 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 VIPP01282 170 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 CD1CP29017 333 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 RPL34P49207 117 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 TAS2R50P59544 299 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SIRPAP78324 504 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM176BQ3YBM2 270 aaPredicted RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OLFML2AQ68BL7 652 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 TP53INP2Q8IXH6 220 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR1L8Q8NGR8 309 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SLC7A10Q9NS82 523 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 IL36AQ9UHA7 158 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 RAI2Q9Y5P3 530 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR51F1A6NGY5 319 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR2T8A6NH00 312 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 FOXH1O75593 365 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SPINK8P0C7L1 97 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 IDSP22304 550 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 TNFSF9P41273 254 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GPR1P46091 355 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 CDC42P60953 191 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SNRPNP63162 240 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 RAB40BQ12829 278 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 LYRM7Q5U5X0 104 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM225Q6GV28 225 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR52L1Q8NGH7 329 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 HPDLQ96IR7 371 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 FAM206AQ9NX38 181 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 ELOVL5Q9NYP7 299 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 A0A1B0GW64 132 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE12JA6NER3 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE7O76087 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE12FP0CL80 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE12GP0CL81 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE12IP0CL82 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 ELAVL4P26378 380 aaKnown RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GAGE4Q13068 117 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 GGTA1PQ4G0N0 100 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 UTF1Q5T230 341 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 FCRL6Q6DN72 434 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 DPPA3Q6W0C5 159 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 OR4K5Q8NGD3 323 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SP7Q8TDD2 431 aaPredicted RBP7.82□□□□□ -1.16
VPS13D-212ENST00000543766 FRZBQ92765 325 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 COPS8Q99627 209 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 HCAR1Q9BXC0 346 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 SLC25A19Q9HC21 320 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 PIKFYVEQ9Y2I7 2098 aa7.82□□□□□ -1.16
VPS13D-212ENST00000543766 A0A1B0GV50 99 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF727A8MUV8 499 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 VTNP04004 478 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 FURINP09958 794 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 LILRA4P59901 499 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 PRICKLE4Q2TBC4 344 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 CD300EQ496F6 205 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 C6orf136Q5SQH8 315 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 SFRP4Q6FHJ7 346 aaPredicted RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 CTU1Q7Z7A3 348 aaKnown RBP7.81□□□□□ -1.16
VPS13D-212ENST00000543766 SLC39A11Q8N1S5 342 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 OR11G2Q8NGC1 345 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM163Q8TC26 289 aa7.81□□□□□ -1.16
VPS13D-212ENST00000543766 MRAPQ8TCY5 172 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms