RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 FPR2P25090 351 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 RBP2P50120 134 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 PABPC1L2AQ5JQF8 200 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 ARRDC1Q8N5I2 433 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 HAS2Q92819 552 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 RPS10P5Q9NQ39 176 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 CEP192Q8TEP8 1941 aa11.78□□□□□ -0.52
PTPN1-202ENST00000541713 LAMTOR5O43504 91 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 TMEM127O75204 238 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 CST7O76096 145 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 OR13C7P0DN81 318 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 SLC25A4P12235 298 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 PLA2G5P39877 138 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 KCNJ3P48549 501 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 RPS16P62249 146 aaKnown RBP11.77□□□□□ -0.52
PTPN1-202ENST00000541713 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 RPUSD3Q6P087 351 aaKnown RBP11.77□□□□□ -0.52
PTPN1-202ENST00000541713 OR10AD1Q8NGE0 317 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 OR1F12Q8NHA8 337 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.52
PTPN1-202ENST00000541713 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.52
PTPN1-202ENST00000541713 MARVELD3Q96A59 401 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 NABP1Q96AH0 204 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 FOXB1Q99853 325 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 ANXA10Q9UJ72 324 aa11.77□□□□□ -0.52
PTPN1-202ENST00000541713 HAAOP46952 286 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.53
PTPN1-202ENST00000541713 TAS2R46P59540 309 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 ATP1A1-AS1Q5TC04 95 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 PIGMQ9H3S5 423 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 SLC2A8Q9NY64 477 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 NGFP01138 241 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 ZNF708P17019 499 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 Q0VFX4 171 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 PDZK1IP1Q13113 114 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 FAM122CQ6P4D5 195 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 NAT6Q93015 286 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 PTX4Q96A99 478 aa11.77□□□□□ -0.53
PTPN1-202ENST00000541713 MSTNO14793 375 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 HERV-K104P61576 105 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CYCSP99999 105 aaKnown RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 COL19A1Q14993 1142 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CRIP3Q6Q6R5 217 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 FBXW12Q6X9E4 464 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CDX2Q99626 313 aaPredicted RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 RBM7Q9Y580 266 aaKnown RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 GPR37O15354 613 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CLRN3Q8NCR9 226 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 ZNF700Q9H0M5 742 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 OSGIN2Q9Y236 505 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 TUBAL3A6NHL2 446 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CDRT15L2A8MXV6 281 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 CBR3O75828 277 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 GNRHRP30968 328 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 SPEM2Q0P670 501 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 ACER2Q5QJU3 275 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 TIPARPQ7Z3E1 657 aaKnown RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 ZNF611Q8N823 705 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 OR51H1Q8NH63 302 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 RNASE11Q8TAA1 199 aaKnown RBP11.76□□□□□ -0.53
PTPN1-202ENST00000541713 IMMP1LQ96LU5 166 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 DNTTIP1Q9H147 329 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 UQCC1Q9NVA1 299 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
PTPN1-202ENST00000541713 FAM24AA6NFZ4 105 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 GSK3AP49840 483 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 TUSC5Q8IXB3 177 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 SVBPQ8N300 66 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 FADS6Q8N9I5 356 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 OR2Y1Q8NGV0 311 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 FAM213BQ8TBF2 198 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 PLPPR2Q96GM1 343 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 C1orf123Q9NWV4 160 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 NOSIPQ9Y314 301 aaKnown RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 EIF1BO60739 113 aaKnown RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 CNOT4O95628 575 aaKnown RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 TSPAN15O95858 294 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 ARG1P05089 322 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 HKR1P10072 659 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 ADH6P28332 368 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 ARF1P84077 181 aaKnown RBP11.75□□□□□ -0.53
PTPN1-202ENST00000541713 PLGLB1Q02325 96 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
PTPN1-202ENST00000541713 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms