RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 AGAP20933 346 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 TMEM50BP56557 158 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 KLF3P57682 345 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 KLF9Q13886 244 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 CDNFQ49AH0 187 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 HAGHLQ6PII5 290 aaPredicted RBP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 Q6ZR03 302 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 WDR86Q86TI4 376 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 CADM3Q8N126 398 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 OSR2Q8N2R0 312 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 RAB3CQ96E17 227 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 ESRP2Q9H6T0 727 aaKnown RBP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 RHOFQ9HBH0 211 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 NKIRAS2Q9NYR9 191 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 MTFP1Q9UDX5 166 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 CADP27708 2225 aa12.12□□□□□ -0.47
CYB561A3-216ENST00000540755 LINC00854A0A1B0GVQ3 168 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 TMEM235A6NFC5 223 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 H0YL77 283 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 MFNGO00587 321 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 SYNGR1O43759 233 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 RBBP9O75884 186 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 HNRNPCP07910 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 HIST1H1DP16402 221 aaKnown RBP12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 RAG2P55895 527 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 SELENOVP59797 346 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 TFF3Q07654 80 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 PNLIPRP3Q17RR3 467 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 PLAC9Q5JTB6 97 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 SLAMF9Q96A28 289 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 MRPL24Q96A35 216 aaKnown RBP12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 SEH1LQ96EE3 360 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 NEURL2Q9BR09 285 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 CA10Q9NS85 328 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 ETAA1Q9NY74 926 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 MTCH1Q9NZJ7 389 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 KLK11Q9UBX7 282 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 CACNG2Q9Y698 323 aa12.11□□□□□ -0.47
CYB561A3-216ENST00000540755 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A10PA6NDY2 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A18PA6NE21 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A16PA6NEW6 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A20PA6NIJ5 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A8PA6NJQ4 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A7PA6NKC0 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A22PA8MWA6 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A12PA8MX19 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A5PA8MXJ8 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A23PA8MXZ1 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 TRAPPC2LH3BP13 241 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A15PP0C7V4 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A13PP0C7W8 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A14PP0C7W9 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FAM90A24PP0C7X0 464 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 GNB3P16520 340 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 BCL3P20749 454 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 BLVRBP30043 206 aaPredicted RBP12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 SLC6A1P30531 599 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 NPBWR2P48146 333 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 SRP9P49458 86 aaKnown RBP12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 ACTBP60709 375 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FGF12P61328 243 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 BTG1P62324 171 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 ACTG1P63261 375 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 AGAP6Q5VW22 663 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 VHLLQ6RSH7 139 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 SLC22A25Q6T423 547 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 LRP11Q86VZ4 500 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 FBXL14Q8N1E6 418 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 CREB3L1Q96BA8 519 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 ARHGAP5-AS1Q96IT6 56 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 MARVELD1Q9BSK0 173 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 MRPL37Q9BZE1 423 aaKnown RBP12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 TLNRD1Q9H1K6 362 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 PLK3Q9H4B4 646 aa12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 ZMAT3Q9HA38 289 aaKnown RBP12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF107Q9UII5 783 aaPredicted RBP12.1□□□□□ -0.47
CYB561A3-216ENST00000540755 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 SSX4O60224 188 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 CA11O75493 328 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 CLDN14O95500 239 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 CSF1P09603 554 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 GABRR1P24046 479 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 CD200P41217 278 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 KIR2DL3P43628 341 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 ZNF154Q13106 437 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
CYB561A3-216ENST00000540755 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms