RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZNF626Q68DY1 528 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 C12orf73Q69YU5 71 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CCBE1Q6UXH8 406 aaPredicted RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 GDPD3Q7L5L3 318 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 SSX6Q7RTT6 188 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 GID4Q8IVV7 300 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 Q8N2B8 174 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 YIPF7Q8N8F6 280 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 MALSU1Q96EH3 234 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CEP19Q96LK0 163 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 IL4I1Q96RQ9 567 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 TBX5Q99593 518 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 CADM1Q9BY67 442 aaKnown RBP11.41□□□□□ -0.58
SNHG1-213ENST00000540725 ABCB10Q9NRK6 738 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 PITPNC1Q9UKF7 332 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 SLC7A11Q9UPY5 501 aa11.41□□□□□ -0.58
SNHG1-213ENST00000540725 IGKV1-27A0A075B6S5 117 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 F8VVB4 439 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 F8VWA3 439 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 H3BSH0 61 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 PRB2P02812 416 aaPredicted RBP11.4□□□□□ -0.59
SNHG1-213ENST00000540725 KRT8P05787 483 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 IGHV1-8P0DP01 117 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 CNN3Q15417 329 aaKnown RBP11.4□□□□□ -0.59
SNHG1-213ENST00000540725 UBE2V2Q15819 145 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 SSX2Q16385 188 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 FBLN7Q53RD9 439 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 CATSPERDQ86XM0 798 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 OR8H2Q8N162 312 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 OR11H6Q8NGC7 330 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 SLAMF9Q96A28 289 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 SLC7A6OSQ96CW6 309 aaPredicted RBP11.4□□□□□ -0.59
SNHG1-213ENST00000540725 MTCH1Q9NZJ7 389 aa11.4□□□□□ -0.59
SNHG1-213ENST00000540725 SYT7O43581 403 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 GATBO75879 557 aaKnown RBP11.39□□□□□ -0.59
SNHG1-213ENST00000540725 DNAJC8O75937 253 aaPredicted RBP11.39□□□□□ -0.59
SNHG1-213ENST00000540725 INMTO95050 263 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 CD28P10747 220 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 FUT6P51993 359 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 MEF2CQ06413 473 aaPredicted RBP11.39□□□□□ -0.59
SNHG1-213ENST00000540725 DYNC1I2Q13409 638 aaKnown RBP11.39□□□□□ -0.59
SNHG1-213ENST00000540725 EDDM3AQ14507 147 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 TCF23Q7RTU1 214 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 SNX22Q96L94 193 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 ZNF714Q96N38 554 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 PRSS22Q9GZN4 317 aa11.39□□□□□ -0.59
SNHG1-213ENST00000540725 WARS2Q9UGM6 360 aaKnown RBP11.39□□□□□ -0.59
SNHG1-213ENST00000540725 A0A1W2PQL4 384 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-213ENST00000540725 TMEM82A0PJX8 343 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 METTL15A6NJ78 407 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 G3V2T6 193 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 F2RL2O00254 374 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 XPNPEP2O43895 674 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 APOL3O95236 402 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 DYNLT3P51808 116 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 OR12D2P58182 307 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ACTA2P62736 377 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ACTG2P63267 376 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ACTC1P68032 377 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ACTA1P68133 377 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 EMX1Q04741 257 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ATP6AP1Q15904 470 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 KDM4DQ6B0I6 523 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 Q6ZPA2 131 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 SLC25A26Q70HW3 274 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 EGFL6Q8IUX8 553 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 WIPF2Q8TF74 440 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-213ENST00000540725 EMG1Q92979 244 aaKnown RBP11.38□□□□□ -0.59
SNHG1-213ENST00000540725 R3HDM4Q96D70 268 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 BORCS8Q96FH0 119 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 MMP28Q9H239 520 aa11.38□□□□□ -0.59
SNHG1-213ENST00000540725 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.38□□□□□ -0.59
SNHG1-213ENST00000540725 hADV38S2A0JD32 116 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 PEX14O75381 377 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 HAND1O96004 215 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 IGHA1P01876 353 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 OR2T7P0C7T2 308 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 JUNBP17275 347 aaPredicted RBP11.37□□□□□ -0.59
SNHG1-213ENST00000540725 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
SNHG1-213ENST00000540725 MINOS1Q5TGZ0 78 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 REC114Q7Z4M0 266 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 NDUFA11Q86Y39 141 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 ZNF676Q8N7Q3 588 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 TPRX1Q8N7U7 411 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 CCDC54Q8NEL0 328 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 OR10H4Q8NGA5 316 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 OR5M11Q96RB7 305 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 CITED2Q99967 270 aaPredicted RBP11.37□□□□□ -0.59
SNHG1-213ENST00000540725 ADI1Q9BV57 179 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 WNT10AQ9GZT5 417 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 GABARAPL1Q9H0R8 117 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 IL36RNQ9UBH0 155 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 ENOPH1Q9UHY7 261 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 HILPDAQ9Y5L2 63 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 SESN1Q9Y6P5 492 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms