RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 PSCAO43653 123 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF73O43830 326 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ENTPD6O75354 484 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF708P17019 499 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 CD9P21926 228 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ARL2P36404 184 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TUFMP49411 452 aaKnown RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 HCCSP53701 268 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 FOXA1P55317 472 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 SLC35B1P78383 322 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 STK38Q15208 465 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ATP6V1FQ16864 119 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 STEAP4Q687X5 459 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 EPGNQ6UW88 154 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 DAW1Q8N136 415 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ZFP62Q8NB50 900 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 OR51A7Q8NH64 312 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ITLN2Q8WWU7 325 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TMEM234Q8WY98 164 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 LRRC39Q96DD0 335 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 Q96MT0 163 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF75AQ96N20 296 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 UTP23Q9BRU9 249 aaKnown RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 SIKE1Q9BRV8 207 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TMEM175Q9BSA9 504 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 HIGD2AQ9BW72 106 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 MAP1LC3CQ9BXW4 147 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TM6SF2Q9BZW4 377 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 ARV1Q9H2C2 271 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 OR51B5Q9H339 312 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 C2orf16Q68DN1 1984 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 NPHP4O75161 1426 aaPredicted RBP1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TRAV8-7A0A075B6U6 113 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 RFXANKO14593 260 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 RGS5O15539 181 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 TRAPPC6AO75865 159 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 CDS2O95674 445 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 TTC4O95801 387 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 IGHV3-53P01767 116 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 S100A9P06702 114 aaKnown RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 HLA-GP17693 338 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 HTR2CP28335 458 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 GNRHRP30968 328 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 PSMB2P49721 201 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 MLF1P58340 268 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 RPL31P62899 125 aaKnown RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 RPL18AQ02543 176 aaKnown RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 AADACL4Q5VUY2 407 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 DUPD1Q68J44 220 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 TMEM144Q7Z5S9 345 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 ITPRIPQ8IWB1 547 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 CYB561A3Q8NBI2 242 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 OR6K6Q8NGW6 343 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 NDNFQ8TB73 568 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 ORAOV1Q8WV07 137 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 ING5Q8WYH8 240 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 CENPNQ96H22 339 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 NAPGQ99747 312 aaPredicted RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 C20orf144Q9BQM9 153 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 HINT2Q9BX68 163 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 PRRG3Q9BZD7 231 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 HAUS4Q9H6D7 363 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 ANKHQ9HCJ1 492 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 ABCB9Q9NP78 766 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 AGPAT3Q9NRZ7 376 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 STMN3Q9NZ72 180 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 VAX2Q9UIW0 290 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 RBMX2Q9Y388 322 aaKnown RBP1.38□□□□□ -2.19
CCDC7-209ENST00000539197 PPIL1Q9Y3C6 166 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 V9GYY9 64 aa1.38□□□□□ -2.19
CCDC7-209ENST00000539197 SBNO1A3KN83 1393 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 IGHV2OR16-5A0A0B4J2B6 119 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 IGLL5B9A064 214 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 C9JQL5 133 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 SC5DO75845 299 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 SNRPAP09012 282 aaKnown RBP1.37□□□□□ -2.19
CCDC7-209ENST00000539197 TPM1P09493 284 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 SEC11BP0C7V7 166 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 CCDC172P0C7W6 258 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 PAX6P26367 422 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 SLC6A1P30531 599 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ETV1P50549 477 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 TAS2R39P59534 338 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 PSMC5P62195 406 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 SLC35A1P78382 337 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 IFFO1Q0D2I5 559 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ST3GAL4Q11206 333 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 DYNC1I2Q13409 638 aaKnown RBP1.37□□□□□ -2.19
CCDC7-209ENST00000539197 TAL2Q16559 108 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 FAM27D1Q5T7N8 215 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 PID1Q7Z2X4 250 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ZCCHC24Q8N2G6 241 aaKnown RBP1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ZDHHC22Q8N966 263 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 OR5P3Q8WZ94 311 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 ZNF649Q9BS31 505 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 BEX2Q9BXY8 128 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 STMN4Q9H169 189 aaPredicted RBP1.37□□□□□ -2.19
CCDC7-209ENST00000539197 XKR8Q9H6D3 395 aa1.37□□□□□ -2.19
CCDC7-209ENST00000539197 RDH14Q9HBH5 336 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms