RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 OR3A1P47881 315 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 PSMB2P49721 201 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 CCR5P51681 352 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 SLC37A1P57057 533 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 TMEM215Q68D42 235 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 LEMD1Q68G75 181 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 ZNF770Q6IQ21 691 aaPredicted RBP6.18□□□□□ -1.42
SORT1-209ENST00000538502 CLEC18BQ6UXF7 455 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 MRGPREQ86SM8 312 aa6.18□□□□□ -1.42
SORT1-209ENST00000538502 HELTA6NFD8 242 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 DIRC3C9JPN6 131 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NPIPB8E9PQR5 432 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 SMPD2O60906 423 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ETHE1O95571 254 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 FAM78AQ5JUQ0 283 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TEX30Q5JUR7 227 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 FAM219AQ8IW50 185 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 RHBDD1Q8TEB9 315 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ROBO4Q8WZ75 1007 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 KLF13Q9Y2Y9 288 aaPredicted RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 TRAV34A0A0B4J273 112 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 CTXND1A0A1B0GTU2 59 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 A0A1W2PN81 502 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TRDCB7Z8K6 153 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 CORTO00230 105 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 MVDP53602 400 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 KIAA0040Q15053 153 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ZNF77Q15935 545 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NPEPL1Q8NDH3 523 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 KLHDC9Q8NEP7 349 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 STXBP6Q8NFX7 210 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NUDT8Q8WV74 236 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 MRGPRX3Q96LB0 322 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 PRDM7Q9NQW5 492 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 MBNL1Q9NR56 388 aaKnown RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 FUT9Q9Y231 359 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 AMDHD2Q9Y303 409 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 FER1L6Q2WGJ9 1857 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 CXCL3P19876 107 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 G6PCP35575 357 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ZNF141Q15928 474 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 OR2M3Q8NG83 312 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TOX2Q96NM4 488 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NRIP2Q9BQI9 281 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TMEM38BQ9NVV0 291 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 MARCH5Q9NX47 278 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 CACNA1SQ13698 1873 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TRBV9A0A0B4J1U6 114 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 IFITM10A6NMD0 228 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 OR2J3O76001 311 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 SERF2P84101 59 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 WDFY1Q8IWB7 410 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TBX15Q96SF7 602 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 ZBP1Q9H171 429 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 PPIL1Q9Y3C6 166 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 SIAH2O43255 324 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 RPS19BP1Q86WX3 136 aaKnown RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 TMEM116Q8NCL8 245 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 IGLV3-16A0A075B6K0 115 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NAT2P11245 290 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 FABP2P12104 132 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 CD27P26842 260 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 TAS2R60P59551 318 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 EWSR1Q01844 656 aaKnown RBP eCLIP6.17□□□□□ -1.42
SORT1-209ENST00000538502 ZNF79Q15937 498 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 NKAIN2Q5VXU1 208 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 VHLLQ6RSH7 139 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 LILRA3Q8N6C8 439 aaPredicted RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 OR1P1Q8NH06 330 aa6.17□□□□□ -1.42
SORT1-209ENST00000538502 CNRIP1Q96F85 164 aaPredicted RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 DNAJB12Q9NXW2 375 aaKnown RBP6.17□□□□□ -1.42
SORT1-209ENST00000538502 LINC01553A4QN01 128 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 SYNGR2O43760 224 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 B3GALT4O96024 378 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 HBZP02008 142 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 EDN3P14138 238 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 CDX1P47902 265 aaPredicted RBP6.16□□□□□ -1.42
SORT1-209ENST00000538502 CD300CQ08708 224 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 RGS7BPQ6MZT1 257 aaPredicted RBP6.16□□□□□ -1.42
SORT1-209ENST00000538502 PDPNQ86YL7 162 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 ZNF547Q8IVP9 402 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 OR5AS1Q8N127 324 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 D2HGDHQ8N465 521 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 NUBPLQ8TB37 319 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 BADQ92934 168 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 GPX7Q96SL4 187 aaPredicted RBP6.16□□□□□ -1.42
SORT1-209ENST00000538502 CACNG5Q9UF02 275 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 CITO14578 2027 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 IGF2P01344 180 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 VDAC1P21796 283 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 CEACAM6P40199 344 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 CXCL12P48061 93 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 MMP16P51512 607 aa6.16□□□□□ -1.42
SORT1-209ENST00000538502 AGFG1P52594 562 aaKnown RBP6.16□□□□□ -1.42
SORT1-209ENST00000538502 RPL11P62913 178 aaKnown RBP6.16□□□□□ -1.42
SORT1-209ENST00000538502 TP53I13Q8NBR0 393 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms