RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 NSUN5P1Q3KNT7 163 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 DNAL1Q4LDG9 190 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 FBLN7Q53RD9 439 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 ZNF626Q68DY1 528 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 LIAT1Q6ZQX7 453 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 Q6ZS46 218 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 TCF23Q7RTU1 214 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 CATSPERDQ86XM0 798 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 TMEM219Q86XT9 240 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 YIPF7Q8N8F6 280 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 ASCC1Q8N9N2 400 aaKnown RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 OR11H6Q8NGC7 330 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 OR13D1Q8NGV5 346 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 WIPF2Q8TF74 440 aaPredicted RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 SLAMF9Q96A28 289 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 KCTD12Q96CX2 325 aaKnown RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 MALSU1Q96EH3 234 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 CADM1Q9BY67 442 aaKnown RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 KRT84Q9NSB2 600 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 SLC7A11Q9UPY5 501 aa6.82□□□□□ -1.32
USP28-203ENST00000537490 TBL2Q9Y4P3 447 aaKnown RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 PRKDCP78527 4128 aaKnown RBP6.82□□□□□ -1.32
USP28-203ENST00000537490 A0A1W2PQL4 384 aaPredicted RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 ADARB2-AS1A8MUL3 147 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 SYT7O43581 403 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 FBXO24O75426 580 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 DNAJC8O75937 253 aaPredicted RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 APOL3O95236 402 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 KRT8P05787 483 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 IGHV1-8P0DP01 117 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 POLR2IP36954 125 aaKnown RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 BLCAPP62952 87 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 DYNC1I2Q13409 638 aaKnown RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 CNN3Q15417 329 aaKnown RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 KDM4DQ6B0I6 523 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 Q6ZPA2 131 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 GDPD3Q7L5L3 318 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 EGFL6Q8IUX8 553 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 OR8H2Q8N162 312 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 TPRX1Q8N7U7 411 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 DTX3Q8N9I9 347 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 OR52N4Q8NGI2 321 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 RPS4Y2Q8TD47 263 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 SNX22Q96L94 193 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 CEP19Q96LK0 163 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 OR5M11Q96RB7 305 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
USP28-203ENST00000537490 CDCA4Q9BXL8 241 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 PRRG3Q9BZD7 231 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 WNT10AQ9GZT5 417 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 MMP28Q9H239 520 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 ABCB10Q9NRK6 738 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 IL36RNQ9UBH0 155 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.81□□□□□ -1.32
USP28-203ENST00000537490 NOTCH3Q9UM47 2321 aa6.81□□□□□ -1.32
USP28-203ENST00000537490 METTL15A6NJ78 407 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 G3V2T6 193 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 PSPNO60542 156 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 MMP23AO75900 390 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 IGHA1P01876 353 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 RBP4P02753 201 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 OR2T7P0C7T2 308 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 CALCBP10092 127 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 DUSP1P28562 367 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 KIR3DL2P43630 455 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 NPBWR2P48146 333 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 DYNLT3P51808 116 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 FUT6P51993 359 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ACTA2P62736 377 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ACTG2P63267 376 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ACTC1P68032 377 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ACTA1P68133 377 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 EMX1Q04741 257 aaPredicted RBP6.8□□□□□ -1.32
USP28-203ENST00000537490 MEF2CQ06413 473 aaPredicted RBP6.8□□□□□ -1.32
USP28-203ENST00000537490 EDDM3AQ14507 147 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ATP6AP1Q15904 470 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 SLC25A26Q70HW3 274 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 AMIGO2Q86SJ2 522 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 GID4Q8IVV7 300 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 RDH10Q8IZV5 341 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 PRSS35Q8N3Z0 413 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 OR4S1Q8NGB4 309 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 EMG1Q92979 244 aaKnown RBP6.8□□□□□ -1.32
USP28-203ENST00000537490 FOXRED1Q96CU9 486 aaPredicted RBP6.8□□□□□ -1.32
USP28-203ENST00000537490 R3HDM4Q96D70 268 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 BORCS8Q96FH0 119 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 ZNF714Q96N38 554 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 PRSS22Q9GZN4 317 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 CHST5Q9GZS9 411 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 PLEKHA1Q9HB21 404 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 WARS2Q9UGM6 360 aaKnown RBP6.8□□□□□ -1.32
USP28-203ENST00000537490 PITPNC1Q9UKF7 332 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 HILPDAQ9Y5L2 63 aa6.8□□□□□ -1.32
USP28-203ENST00000537490 PLXNB1O43157 2135 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 IGHV2-26A0A0B4J1V2 119 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 IGKV1-9A0A0C4DH69 117 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 hADV38S2A0JD32 116 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 GATBO75879 557 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms