RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 ST3GAL6Q9Y274 331 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 FRYLO94915 3013 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 IGKV1-12A0A0C4DH73 117 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 A0A0G2JMM0 328 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 A0A1W2PPB8 328 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 A0A1W2PRS3 328 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 KIR3DP1A8MWS1 328 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 MED6O75586 246 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 IGKV1D-12P01611 117 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 RFPL3SP0C7P2 107 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 CEACAM16Q2WEN9 425 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 ABLIM2Q6H8Q1 611 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 TMEM88Q6PEY1 159 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 FBXL14Q8N1E6 418 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 UBAC2Q8NBM4 344 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 OR10D3Q8NH80 312 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 WNT2BQ93097 391 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 TOMM40LQ969M1 308 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 SYT3Q9BQG1 590 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 ZFP57Q9NU63 452 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 ZNF581Q9P0T4 197 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 RCC2Q9P258 522 aaKnown RBP13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
CHMP1A-202ENST00000535997 hCG_38984A0A1B0GV85 526 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 E5RGE8 158 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 RNASEK-C17orf49H0YIS7 233 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 CER1O95813 267 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TCN2P20062 427 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 PMELP40967 661 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 LPAR6P43657 344 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF92Q03936 586 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 OR8B8Q15620 311 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 PIGYQ3MUY2 71 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 PPP1R32Q7Z5V6 425 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 NRIP2Q9BQI9 281 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 FBXL17Q9UF56 701 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 NSG2Q9Y328 171 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 POMT1Q9Y6A1 747 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TRIOBPQ9H2D6 2365 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 PATE3B3GLJ2 98 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 B4E171 279 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TRAPPC6AO75865 159 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 RCC1P18754 421 aaPredicted RBP13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TSPAN7P41732 249 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 F2RL1P55085 397 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 UCP3P55916 312 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TMEM211Q6ICI0 200 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 SKA3Q8IX90 412 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 IQCF2Q8IXL9 164 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 TMEM231Q9H6L2 316 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF286AQ9HBT8 521 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 GPR35Q9HC97 309 aa13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 LSM5Q9Y4Y9 91 aaKnown RBP13.89□□□□□ -0.19
CHMP1A-202ENST00000535997 ZNF816-ZNF321PA0A0X1KG74 233 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 LRRC3CA6NJW4 275 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 NDUFA2O43678 99 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 CD5P06127 495 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 OR5AC1P0C628 307 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 TDGF1P13385 188 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 MUC1P15941 1255 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 CLDN15P56746 228 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 Q0VFX4 171 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 MALLQ13021 153 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 SP6Q3SY56 376 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 NRN1LQ496H8 165 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 ADAT1Q9BUB4 502 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 SLC2A9Q9NRM0 540 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 TCFL5Q9UL49 500 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 SHANK1Q9Y566 2161 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 H7C1Q1 480 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 XRCC2O43543 280 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 CYTIPO60759 359 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 PDCD6O75340 191 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 FBXO24O75426 580 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 FARS2O95363 451 aaKnown RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 MBPP02686 304 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 NME2P22392 152 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 PRSS12P56730 875 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 HFEQ30201 348 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 WIPI1Q5MNZ9 446 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 ACER2Q5QJU3 275 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 GPR157Q5UAW9 335 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 BRICD5Q6PL45 260 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 LIAT1Q6ZQX7 453 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 LYPD6BQ8NI32 183 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 FGFBP3Q8TAT2 258 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 PIGCQ92535 297 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 CPNE4Q96A23 557 aaPredicted RBP13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 SPSB4Q96A44 273 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
CHMP1A-202ENST00000535997 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PVALBP20472 110 aaPredicted RBP13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 FUT3P21217 361 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 OTX2P32243 289 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 CYB561P49447 251 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 DCAF12Q5T6F0 453 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 PLCXD3Q63HM9 321 aa13.87□□□□□ -0.19
CHMP1A-202ENST00000535997 SLC22A25Q6T423 547 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms