RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 SLURP1P55000 103 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ISL1P61371 349 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ESRRGP62508 458 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 RUNX1Q01196 453 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 CFHR3Q02985 330 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 HES1Q14469 280 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 BAIAP2L2Q6UXY1 529 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 GDPD3Q7L5L3 318 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ZDHHC23Q8IYP9 409 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ABHD12Q8N2K0 398 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 LINC00471Q8N535 108 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ASCC1Q8N9N2 400 aaKnown RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 POC1AQ8NBT0 407 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 OR56B4Q8NH76 319 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ZNF671Q8TAW3 534 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 MYOZ3Q8TDC0 251 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 UBLCP1Q8WVY7 318 aaPredicted RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 LZICQ8WZA0 190 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 SGK3Q96BR1 496 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 EAF1Q96JC9 268 aaPredicted RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 PRRC1Q96M27 445 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 OR4C12Q96R67 309 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 GPX7Q96SL4 187 aaPredicted RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 KCNJ15Q99712 375 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 NRIP2Q9BQI9 281 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 OR51I2Q9H344 312 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 RPRD1BQ9NQG5 326 aaKnown RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 AP5S1Q9NUS5 200 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 MRPL22Q9NWU5 206 aaKnown RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 RASL12Q9NYN1 266 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 ACTR3BQ9P1U1 418 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 OR14J1Q9UGF5 321 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 BAG5Q9UL15 447 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 KLK5Q9Y337 293 aaPredicted RBP4.95□□□□□ -1.62
CD44-237ENST00000534082 IER3IP1Q9Y5U9 82 aa4.95□□□□□ -1.62
CD44-237ENST00000534082 MYCBP2O75592 4640 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 hADV38S2A0JD32 116 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM172BPA6NC97 362 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A18PA6NE21 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 ARRDC5A6NEK1 342 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A16PA6NEW6 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A20PA6NIJ5 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A9PA6NNJ1 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A12PA8MX19 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A5PA8MXJ8 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 OOSP1A8MZH6 123 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 ZNF732B4DXR9 585 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 K7N7A8 449 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 MMP23AO75900 390 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 TXNDC12O95881 172 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 RENP00797 406 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 CST4P01036 141 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 SPARCP09486 303 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A15PP0C7V4 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A13PP0C7W8 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A14PP0C7W9 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM90A24PP0C7X0 464 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 VDAC1P21796 283 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 ACKR3P25106 362 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 CX3CR1P49238 355 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 RPS6KA3P51812 740 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 MTPNP58546 118 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 GNG3P63215 75 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 CBX1P83916 185 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 PITPNAQ00169 270 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 MEF2CQ06413 473 aaPredicted RBP4.94□□□□□ -1.62
CD44-237ENST00000534082 EDDM3AQ14507 147 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 HNF4GQ14541 408 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 TAF13Q15543 124 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 VMACQ2NL98 169 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 HLA-DRB5Q30154 266 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 PRAMEF5Q5TYX0 476 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM53AQ6NSI3 398 aaPredicted RBP4.94□□□□□ -1.62
CD44-237ENST00000534082 HAGHLQ6PII5 290 aaPredicted RBP4.94□□□□□ -1.62
CD44-237ENST00000534082 FAM57BQ71RH2 274 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 DCXRQ7Z4W1 244 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 RTN4RL2Q86UN3 420 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 ZBTB46Q86UZ6 589 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 THNSL2Q86YJ6 484 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 PGAM4Q8N0Y7 254 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 AQP3Q92482 292 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 PIGCQ92535 297 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 CREB3L1Q96BA8 519 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 SLAMF6Q96DU3 332 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 SPDL1Q96EA4 605 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 UBE2E2Q96LR5 201 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 OR52B2Q96RD2 323 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 NMNAT3Q96T66 252 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 FN3KQ9H479 309 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 CENPMQ9NSP4 180 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 ERVK13-1Q9NX77 482 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 RHCGQ9UBD6 479 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 SLC22A13Q9Y226 551 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 VSIG4Q9Y279 399 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 LINC00312Q9Y6C7 94 aa4.94□□□□□ -1.62
CD44-237ENST00000534082 A0A087WUU8 490 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 ZNF878C9JN71 531 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 LY6LH3BQJ8 138 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 BUB1B-PAK6H3BSN5 160 aa4.93□□□□□ -1.62
CD44-237ENST00000534082 BIRC5O15392 142 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms