RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 HIST2H3AQ71DI3 136 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 TMED6Q8WW62 240 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 SAT2Q96F10 170 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-221ENST00000532331 TINAGL1Q9GZM7 467 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-221ENST00000532331 AKIP1Q9NQ31 210 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 ZNF331Q9NQX6 463 aaPredicted RBP9.97□□□□□ -0.81
PTPRK-221ENST00000532331 ZBTB25P24278 435 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 ST3GAL2Q16842 350 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 LCN15Q6UWW0 184 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 ZNF485Q8NCK3 441 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 FBXW5Q969U6 566 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 TMEM230Q96A57 120 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 SIPA1L1O43166 1804 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 PTGFRP43088 359 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 P2RX3P56373 397 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 DPF1Q92782 380 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 LHX4Q969G2 390 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 POM121L2Q96KW2 1035 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 MAGT1Q9H0U3 335 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 HEXA-AS1Q9H8Q6 139 aa9.97□□□□□ -0.81
PTPRK-221ENST00000532331 ADAM5Q6NVV9 412 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 TIPARPQ7Z3E1 657 aaKnown RBP9.96□□□□□ -0.81
PTPRK-221ENST00000532331 PPP1R32Q7Z5V6 425 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 OR10AD1Q8NGE0 317 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 OR52N4Q8NGI2 321 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 SLC25A32Q9H2D1 315 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 CISD1Q9NZ45 108 aaKnown RBP9.96□□□□□ -0.81
PTPRK-221ENST00000532331 TET1Q8NFU7 2136 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 ZNF236Q9UL36 1845 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 A0A0J9YW62 118 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 CLEC18AA5D8T8 446 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 ZFPL1O95159 310 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 BAK1Q16611 211 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 MDP1Q86V88 176 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 CLEC18CQ8NCF0 446 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 NDFIP1Q9BT67 221 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 OR2H1Q9GZK4 316 aa9.96□□□□□ -0.81
PTPRK-221ENST00000532331 MS4A7Q9GZW8 240 aaPredicted RBP9.96□□□□□ -0.81
PTPRK-221ENST00000532331 FOXD3Q9UJU5 478 aaPredicted RBP9.96□□□□□ -0.81
PTPRK-221ENST00000532331 OR7C2O60412 319 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 CTF1Q16619 201 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 C17orf107Q6ZR85 190 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 ZFP62Q8NB50 900 aaPredicted RBP9.96□□□□□ -0.82
PTPRK-221ENST00000532331 TMEM104Q8NE00 496 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 SFXN3Q9BWM7 321 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 FLRT3Q9NZU0 649 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 CROCCQ5TZA2 2017 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 TIAF1O95411 115 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 IGHA2P01877 340 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 FOXO1Q12778 655 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 LINC00303Q3SY05 128 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 ZAR1Q86SH2 424 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 LYG1Q8N1E2 194 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 TMEM38BQ9NVV0 291 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 CLN8Q9UBY8 286 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 CES1P1Q9UKY3 287 aa9.96□□□□□ -0.82
PTPRK-221ENST00000532331 M0R1X1 148 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SMPD2O60906 423 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 NGFRP08138 427 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 MDH2P40926 338 aaKnown RBP9.95□□□□□ -0.82
PTPRK-221ENST00000532331 H3F3CQ6NXT2 135 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 THSD4Q6ZMP0 1018 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 OR4F5Q8NH21 305 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SLC25A40Q8TBP6 338 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 OR4F4Q96R69 305 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 GAB2Q9UQC2 676 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 TMEM272A0A1B0GTI8 110 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SULT1A3P0DMM9 295 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SULT1A4P0DMN0 295 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 HIST1H1DP16402 221 aaKnown RBP9.95□□□□□ -0.82
PTPRK-221ENST00000532331 FPR2P25090 351 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 HAGHQ16775 308 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 DGAT2L6Q6ZPD8 337 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 C1orf174Q8IYL3 243 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 TINAGQ9UJW2 476 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 ZDBF2Q9HCK1 2354 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 GREB1LQ9C091 1923 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-221ENST00000532331 MPZL1O95297 269 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SLC25A6P12236 298 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 MAGEB1P43366 347 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 RAB7AP51149 207 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 ATP5J2P56134 94 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 IGFBP7Q16270 282 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 DIRC2Q96SL1 478 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 PIMREGQ9BSJ6 248 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 ZNF275Q9NSD4 429 aaPredicted RBP9.95□□□□□ -0.82
PTPRK-221ENST00000532331 RCL1Q9Y2P8 373 aaKnown RBP9.95□□□□□ -0.82
PTPRK-221ENST00000532331 LIMS3P0CW19 117 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 LIMS4P0CW20 117 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 TIGITQ495A1 244 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 CCDC190Q86UF4 302 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 OR8U1Q8NH10 309 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 ARHGAP5-AS1Q96IT6 56 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 SPSB2Q99619 263 aa9.95□□□□□ -0.82
PTPRK-221ENST00000532331 KCNJ3P48549 501 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms