RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 HTR3BO95264 441 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 IL2RAP01589 272 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 PMP2P02689 132 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 TNFSF10P50591 281 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 IL13RA1P78552 427 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 SURF2Q15527 256 aaPredicted RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 GRK1Q15835 563 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 CHRFAM7AQ494W8 412 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 ZNF766Q5HY98 468 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 TMEM42Q69YG0 159 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 MEX3BQ6ZN04 569 aaKnown RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 MOB3CQ70IA8 216 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 PEG10Q86TG7 708 aaKnown RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 TUSC5Q8IXB3 177 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 GVQW1Q8N7I0 195 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 ZSCAN4Q8NAM6 433 aaPredicted RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 PXT1Q8NFP0 134 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 OR5D18Q8NGL1 313 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 NINJ1Q92982 152 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 ELMOD3Q96FG2 381 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 TAAR6Q96RI8 345 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 DPCDQ9BVM2 203 aaPredicted RBP10.17□□□□□ -0.78
USF1-208ENST00000528768 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 CHST6Q9GZX3 395 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 GLRX2Q9NS18 164 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 SLC7A10Q9NS82 523 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 PLEKHJ1Q9NW61 149 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 HSF4Q9ULV5 492 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 ZNF175Q9Y473 711 aa10.17□□□□□ -0.78
USF1-208ENST00000528768 NCOA6Q14686 2063 aaPredicted RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 A0A0A6YYD4 124 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 A0A0B4J2A0 478 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 hCG_38984A0A1B0GV85 526 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 A0A1B0GW55 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 C9orf170A2RU37 121 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 RFPL4AA6NLU0 287 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 MCRIP1C9JLW8 97 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 E9PLN8 166 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 RFPL4AL1F8VTS6 287 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 C19orf84I3L1E1 186 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 TPD52L2O43399 206 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 RP2O75695 350 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUS4LO95620 317 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L2P0CJ85 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L3P0CJ86 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L4P0CJ87 422 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L5P0CJ88 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L6P0CJ89 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4L7P0CJ90 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 PPP3CBP16298 524 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 HLA-GP17693 338 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 ZBTB25P24278 435 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 FPR2P25090 351 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 S100A11P31949 105 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 NTF4P34130 210 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 RFC3P40938 356 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 SNU13P55769 128 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 TMEM50BP56557 158 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 SRSF4Q08170 494 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 DHRS2Q13268 280 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 IKZF1Q13422 519 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 OR8B8Q15620 311 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 PLAC9Q5JTB6 97 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 SFRP5Q5T4F7 317 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 PLCXD3Q63HM9 321 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 NSUN5P2Q63ZY6 315 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 OR52W1Q6IF63 320 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 ASCL4Q6XD76 172 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 MRPL21Q7Z2W9 205 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 P4HA3Q7Z4N8 544 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 OR8H3Q8N146 312 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 OR5M8Q8NGP6 311 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 COQ8AQ8NI60 647 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 MITD1Q8WV92 249 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 FBXW5Q969U6 566 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 SPSB4Q96A44 273 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 APOBEC3DQ96AK3 386 aaPredicted RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 HIST1H2AAQ96QV6 131 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 HES7Q9BYE0 225 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 PPA2Q9H2U2 334 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 DUX4Q9UBX2 424 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 SHPKQ9UHJ6 478 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 C14orf166Q9Y224 244 aaKnown RBP10.16□□□□□ -0.78
USF1-208ENST00000528768 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 ACANP16112 2415 aa10.16□□□□□ -0.78
USF1-208ENST00000528768 FXYD6-FXYD2A0A087WZ82 144 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 A0A0D9SG52 128 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 C5orf63A6NC05 138 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 CELA3AP09093 270 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 VAMP1P23763 118 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 DTYMKP23919 212 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 PMELP40967 661 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 ARPC4P59998 168 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 FAM3AP98173 230 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 MICBQ29980 383 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 KRTCAP3Q53RY4 240 aa10.15□□□□□ -0.78
USF1-208ENST00000528768 TMEM128Q5BJH2 165 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms