RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 E9PI62 339 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 H0YAE9 185 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 K7N7A8 449 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZFPL1O95159 310 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 CLIC3O95833 236 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 TK1P04183 234 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 EEF1B2P24534 225 aaKnown RBP9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 CAPZA1P52907 286 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 RPL22L1Q6P5R6 122 aaKnown RBP9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMPRSS11AQ6ZMR5 421 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 SERPINA12Q8IW75 414 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 PARP16Q8N5Y8 322 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR51A4Q8NGJ6 313 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR5D14Q8NGL3 314 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR5D13Q8NGL4 314 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR10AC1Q8NH08 325 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 TNFRSF14Q92956 283 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 SLAMF9Q96A28 289 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OPALINQ96PE5 141 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZCCHC4Q9H5U6 513 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 DCLRE1BQ9H816 532 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 RHOFQ9HBH0 211 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR14J1Q9UGF5 321 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 POMT1Q9Y6A1 747 aa9.94□□□□□ -0.82
TRAPPC4-209ENST00000528230 TRBV2A0A0J9YWF9 115 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 F8VVB4 439 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 F8VWA3 439 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 RNASEK-C17orf49H0YIS7 233 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 MELTFP08582 738 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 OCM2P0CE71 109 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 OCMP0CE72 109 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 CFPP27918 469 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 CAPGP40121 348 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 ETV1P50549 477 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 UBE2E1P51965 193 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 RPL31P62899 125 aaKnown RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 PDZK1IP1Q13113 114 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 MED21Q13503 144 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM200BQ69YZ2 307 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 FIP1L1Q6UN15 594 aaKnown RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 LDLRAD3Q86YD5 345 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 SAXO1Q8IYX7 474 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 FAM185AQ8N0U4 392 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 CNIH3Q8TBE1 160 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 RPS4Y2Q8TD47 263 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 SNX22Q96L94 193 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 PDCD1LG2Q9BQ51 273 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 ELL3Q9HB65 397 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 SIRT7Q9NRC8 400 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 C19orf12Q9NSK7 152 aa9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 DIMT1Q9UNQ2 313 aaKnown RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 EXOSC1Q9Y3B2 195 aaKnown RBP9.93□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A0U1RQK1 487 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 hCG_1809904A0A1W2PP81 198 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A1W2PPE2 198 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A1W2PR64 198 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 A0A1W2PRV1 198 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 NPFFO15130 113 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 OGG1O15527 345 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF737O75373 536 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 MYL12AP19105 171 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 CEBPDP49716 269 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 RPL15P61313 204 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 COL10A1Q03692 680 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 ACSM1Q08AH1 577 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZNF146Q15072 292 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 AWAT1Q58HT5 328 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 PDZD9Q8IXQ8 264 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 C8orf59Q8N0T1 100 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 FAM58AQ8N1B3 248 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 BATF2Q8N1L9 274 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 C3orf56Q8N813 242 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 ZSCAN4Q8NAM6 433 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 OR13C9Q8NGT0 318 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 SSMEM1Q8WWF3 244 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 EMG1Q92979 244 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 TMEM80Q96HE8 168 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 VCXQ9H320 206 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 CHCHD3Q9NX63 227 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 BABAM2Q9NXR7 383 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 GLS2Q9UI32 602 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 DHDHQ9UQ10 334 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 SF3B6Q9Y3B4 125 aaKnown RBP9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 FAM96BQ9Y3D0 163 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 DNHD1Q96M86 4753 aa9.92□□□□□ -0.82
TRAPPC4-209ENST00000528230 ANKRD65E5RJM6 399 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 SULT1B1O43704 296 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 KDM4BO94953 1096 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 INMTO95050 263 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 FBP1P09467 338 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 PIPP12273 146 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 BCL3P20749 454 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 IER3P46695 156 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 NPBWR2P48146 333 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 POU3F4P49335 361 aa9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 GTF2A1P52655 376 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 GABPB1Q06547 395 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC4-209ENST00000528230 CDK5R1Q15078 307 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms