RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 SCGB3A2Q96PL1 93 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 OR5B12Q96R08 314 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 TBX15Q96SF7 602 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ZNF2Q9BSG1 426 aaPredicted RBP3.75□□□□□ -1.81
CD44-220ENST00000525688 ZNF385DQ9H6B1 395 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ZNF430Q9H8G1 570 aaPredicted RBP3.75□□□□□ -1.81
CD44-220ENST00000525688 MARCH5Q9NX47 278 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 CIDEBQ9UHD4 219 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 BTNL2Q9UIR0 455 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 RARRES3Q9UL19 164 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 ASF1AQ9Y294 204 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 RPL36Q9Y3U8 105 aaKnown RBP3.75□□□□□ -1.81
CD44-220ENST00000525688 PLXNA4Q9HCM2 1894 aa3.75□□□□□ -1.81
CD44-220ENST00000525688 WDFY4Q6ZS81 3184 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ATG2AQ2TAZ0 1938 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 IGLV4-3A0A075B6K6 122 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 PVALEFA0A1B0GWK0 134 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 A0A1W2PRG6 482 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 SMIM9A6NGZ8 99 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 C11orf98E9PRG8 122 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 KCNK1O00180 336 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZNF593O00488 134 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 ENTPD6O75354 484 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 CNIH1O95406 144 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 CD8AP01732 235 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 HOXC4P09017 264 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 LINC00614P0C842 121 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 GTF2F2P13984 249 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZNF250P15622 560 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 CASP1P29466 404 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 HRH1P35367 487 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 NDUFA8P51970 172 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 DLX6P56179 175 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZNF121P58317 390 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 RND3P61587 244 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 AP1S1P61966 158 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TGFBR3Q03167 851 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZNF154Q13106 437 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TFDP2Q14188 446 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TOMM34Q15785 309 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 ZBED5Q49AG3 693 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 FAM27D1Q5T7N8 215 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 C1orf146Q5VVC0 180 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 HBMQ6B0K9 141 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 RWDD4Q6NW29 188 aaKnown RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 TRIM40Q6P9F5 258 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 FAM19A5Q7Z5A7 132 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 TMEM144Q7Z5S9 345 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 PIANPQ8IYJ0 282 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 CPNE9Q8IYJ1 553 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 OR10W1Q8NGF6 305 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 OR2G2Q8NGZ5 317 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 HAVCR2Q8TDQ0 301 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TAF15Q92804 592 aaKnown RBP eCLIP3.74□□□□□ -1.81
CD44-220ENST00000525688 RERGQ96A58 199 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 PAGE5Q96GU1 130 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 SEC22AQ96IW7 307 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 SLC45A3Q96JT2 553 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 FAM210BQ96KR6 192 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZNF599Q96NL3 588 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 RBP7Q96R05 134 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 FAM173AQ9BQD7 235 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 HES7Q9BYE0 225 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 KRTAP9-8Q9BYQ0 159 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ZBP1Q9H171 429 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 SIAEQ9HAT2 523 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 MEPEQ9NQ76 525 aaPredicted RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 EHFQ9NZC4 300 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 GNPTGQ9UJJ9 305 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 NTNG1Q9Y2I2 539 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 GOLT1BQ9Y3E0 138 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 L3MBTL1Q9Y468 752 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 MYH11P35749 1972 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TCF20Q9UGU0 1960 aaKnown RBP3.74□□□□□ -1.81
CD44-220ENST00000525688 TCHHQ07283 1943 aa3.74□□□□□ -1.81
CD44-220ENST00000525688 TRGV8A0A0C4DH27 118 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 MIF4GDA9UHW6 222 aaKnown RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 SMKR1H3BMG3 65 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 UBDO15205 165 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TYROBPO43914 113 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 NOS1APO75052 506 aaPredicted RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 SMIM24O75264 130 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 TBX6O95947 436 aaPredicted RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 PPBPP02775 128 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 MT-ND4P03905 459 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CST2P09228 141 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 OR8U9P0C7N5 309 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 CXCL8P10145 99 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 ALOX5APP20292 161 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 F8A1P23610 371 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 PMELP40967 661 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GLP1RP43220 463 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 GSSP48637 474 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 ATP4BP51164 291 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 NDUFV3P56181 108 aaKnown RBP3.73□□□□□ -1.81
CD44-220ENST00000525688 RBX1P62877 108 aa3.73□□□□□ -1.81
CD44-220ENST00000525688 SKP2Q13309 424 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms