RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 YKT6O15498 198 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 FARS2O95363 451 aaKnown RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 SCGB1D2O95969 90 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 CD5P06127 495 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 OR5AC1P0C628 307 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 FOLR3P41439 243 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 PSG4Q00888 419 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 ABCA11PQ4W5N1 156 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 AAED1Q7RTV5 226 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 OSR2Q8N2R0 312 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 KCNE4Q8WWG9 221 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 RTN4IP1Q8WWV3 396 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 SMIM3Q9BZL3 60 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 SAV1Q9H4B6 383 aaPredicted RBP9.61□□□□□ -0.87
HDAC9-228ENST00000524023 BCO1Q9HAY6 547 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 PLEKHA2Q9HB19 425 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF391Q9UJN7 358 aa9.61□□□□□ -0.87
HDAC9-228ENST00000524023 CCDC163A0A0D9SF12 145 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FAM221AA4D161 298 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 CXCL13O43927 109 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 MBPP02686 304 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-228ENST00000524023 P04436 131 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 F2RL1P55085 397 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FXYD4P59646 89 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FAM3AP98173 230 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 RAB11FIP2Q7L804 512 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF100Q8IYN0 542 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FBXL14Q8N1E6 418 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 UBAC2Q8NBM4 344 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 NAXEQ8NCW5 288 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ERGIC1Q969X5 290 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FOXB1Q99853 325 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 SUCNR1Q9BXA5 334 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 WNT5BQ9H1J7 359 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 IL36GQ9NZH8 169 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 MLXQ9UH92 298 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 TIMM10BQ9Y5J6 103 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 hCG_38984A0A1B0GV85 526 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 E5RGE8 158 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 RFPL3SP0C7P2 107 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ID4P47928 161 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 RGS19P49795 217 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FUT6P51993 359 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF92Q03936 586 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 PDZK1IP1Q13113 114 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 CEACAM16Q2WEN9 425 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ABLIM2Q6H8Q1 611 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 Q6ZRG5 221 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 LYZL2Q7Z4W2 148 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 LINC00518Q8N0U6 118 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 LRTM2Q8N967 370 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 FGFBP3Q8TAT2 258 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ADGRG7Q96K78 797 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 OR2H1Q9GZK4 316 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 SLC2A9Q9NRM0 540 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ZFP57Q9NU63 452 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 LHX6Q9UPM6 363 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 NSG2Q9Y328 171 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 KLF2Q9Y5W3 355 aaPredicted RBP9.6□□□□□ -0.87
HDAC9-228ENST00000524023 POMT1Q9Y6A1 747 aa9.6□□□□□ -0.87
HDAC9-228ENST00000524023 C9JQL5 133 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 H7C1Q1 480 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 AGPAT2O15120 278 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 HEXAP06865 529 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 NFYBP25208 207 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 CD80P33681 288 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 TSPO2Q5TGU0 170 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 CLEC9AQ6UXN8 241 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 IQCF2Q8IXL9 164 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 OR10D3Q8NH80 312 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 BSCL2Q96G97 398 aaPredicted RBP9.59□□□□□ -0.87
HDAC9-228ENST00000524023 C18orf12Q96KH6 178 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 ARV1Q9H2C2 271 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF286AQ9HBT8 521 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 GPR35Q9HC97 309 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 SLC7A11Q9UPY5 501 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 ZNF175Q9Y473 711 aa9.59□□□□□ -0.87
HDAC9-228ENST00000524023 CCDC85CA6NKD9 419 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 FAM157AC9JC47 383 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PDCD6O75340 191 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 OR8U9P0C7N5 309 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 HOXA6P31267 233 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 RFC3P40938 356 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 DVL1P1P54792 670 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PCBD1P61457 104 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PDCD1Q15116 288 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 OR8B8Q15620 311 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 SWI5Q1ZZU3 235 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF528Q3MIS6 628 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms