RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 APLFQ8IW19 511 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC22A18ASQ8N1D0 253 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C1orf158Q8N1D5 194 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 GAPTQ8N292 157 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C6orf223Q8N319 242 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 MUC15Q8N387 334 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNF175Q8N4F7 328 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZADH2Q8N4Q0 377 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAM71E2Q8N5Q1 922 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 NATD1Q8N6N6 113 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ARIH2OSQ8N7S6 290 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C4orf32Q8N8J7 132 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 COX18Q8N8Q8 333 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C12orf29Q8N999 325 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 NKAPP1Q8N9T2 125 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 CSNK1G2-AS1Q8NCQ2 148 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM35BQ8NCS4 154 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11H1Q8NG94 326 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 GPR32P1Q8NGA4 272 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4M2Q8NGB6 313 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11H7Q8NGC8 314 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10W1Q8NGF6 305 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4P4Q8NGL7 312 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10G9Q8NGN4 311 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4C13Q8NGP0 309 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10X1Q8NGY0 326 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR6N1Q8NGY5 312 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR2G3Q8NGZ4 309 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR11H2Q8NH07 326 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR4S2Q8NH73 311 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10G6Q8NH81 332 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 MCFD2Q8NI22 146 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 COQ8AQ8NI60 647 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNASE11Q8TAA1 199 aaKnown RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 JOSD2Q8TAC2 188 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF420Q8TAQ5 688 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 NEIL3Q8TAT5 605 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C11orf45Q8TAV5 145 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF519Q8TB69 540 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF564Q8TBZ8 553 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ACTRT1Q8TDG2 376 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 VN1R17PQ8TDU5 208 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC37A2Q8TED4 501 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 AGAP11Q8TF27 550 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SSC4DQ8WTU2 575 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 NPRL2Q8WTW4 380 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 BLNKQ8WV28 456 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 CYGBQ8WWM9 190 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 GEMIN6Q8WXD5 167 aaKnown RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ASB17Q8WXJ9 295 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHCHD10Q8WYQ3 142 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM190Q8WZ59 177 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RGP1Q92546 391 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 UCN3Q969E3 161 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 BORCS5Q969J3 196 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMBIM1Q969X1 311 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 MARC2Q969Z3 335 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 BORCS7Q96B45 105 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAMM41Q96BW9 452 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C12orf43Q96C57 262 aaKnown RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 DCPSQ96C86 337 aaKnown RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 DNAJC19Q96DA6 116 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 DGCR14Q96DF8 476 aaKnown RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SLC25A38Q96DW6 304 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 CNRIP1Q96F85 164 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RMND5BQ96G75 393 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 AURKBQ96GD4 344 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNF185Q96GF1 192 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ATXN7L3BQ96GX2 97 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SFRP2Q96HF1 295 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 GMPPAQ96IJ6 420 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR10C1Q96KK4 312 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 PGLYRP3Q96LB9 341 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 PPP1R36Q96LQ0 422 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 MAGEB18Q96M61 343 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF599Q96NL3 588 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 BIRC8Q96P09 236 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 COL21A1Q96P44 957 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR5M11Q96RB7 305 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 OR52E6Q96RD3 313 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 METTL26Q96S19 204 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 PLEKHF1Q96S99 279 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TSC22D3Q99576 134 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF184Q99676 751 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 DOK1Q99704 481 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 HOPXQ9BPY8 73 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 AIF1LQ9BQI0 150 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 NRIP2Q9BQI9 281 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C20orf144Q9BQM9 153 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 ZNF2Q9BSG1 426 aaPredicted RBP0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 CHCHD5Q9BSY4 110 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 FAAP24Q9BTP7 215 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 RNF126Q9BV68 326 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 EMC6Q9BV81 110 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMEM109Q9BVC6 243 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TMED9Q9BVK6 235 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 C19orf24Q9BVV8 132 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TIPINQ9BVW5 301 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 SFXN3Q9BWM7 321 aa0.45□□□□□ -2.34
RNU4-54P-201ENST00000516428 TAPBPLQ9BX59 468 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms