RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 SERPINA12Q8IW75 414 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 PRR22Q8IZ63 422 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ELMOD2Q8IZ81 293 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR8H3Q8N146 312 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GABRG1Q8N1C3 465 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 EIF4E3Q8N5X7 224 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 APCDD1LQ8NCL9 501 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR2AK2Q8NG84 335 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR4C16Q8NGL9 310 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR1J4Q8NGS1 313 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR6K3Q8NGY3 331 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OR10AC1Q8NH08 325 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC22A8Q8TCC7 542 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RLN3Q8WXF3 142 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 AQP3Q92482 292 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FAM46BQ96A09 425 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CLDN23Q96B33 292 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 ZNF524Q96C55 264 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC25A36Q96CQ1 311 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NTNG2Q96CW9 530 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 C10orf35Q96D05 121 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SEH1LQ96EE3 360 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLC25A44Q96H78 314 aaPredicted RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 SCGB3A2Q96PL1 93 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 AMELYQ99218 206 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 PRRT1Q99946 306 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 DHRS9Q9BPW9 319 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SEC22CQ9BRL7 303 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GINS4Q9BRT9 223 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 MRPL13Q9BYD1 178 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 TTTY10Q9BZA0 68 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CSTL1Q9H114 145 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 DNTTIP1Q9H147 329 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 CHMP1AQ9HD42 196 aaPredicted RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 SERINC1Q9NRX5 453 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FGF21Q9NSA1 209 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GLTPQ9NZD2 209 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 DHCR7Q9UBM7 475 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 GHRLQ9UBU3 117 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GAGE2DQ9UEU5 116 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SHPKQ9UHJ6 478 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GLS2Q9UI32 602 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NXT1Q9UKK6 140 aaKnown RBP3.22□□□□□ -1.89
CAST-242ENST00000515063 ANAPC10Q9UM13 185 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 NPIPA1Q9UND3 350 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FLVCR2Q9UPI3 526 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 GAB2Q9UQC2 676 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 HDGFL3Q9Y3E1 203 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RHBDD3Q9Y3P4 386 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 PCDHGA5Q9Y5G8 931 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SLCO1B1Q9Y6L6 691 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 SEC16AO15027 2179 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 FREM3P0C091 2139 aa3.22□□□□□ -1.89
CAST-242ENST00000515063 RALGAPA1Q6GYQ0 2036 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 LOC102723996A0A087X1L8 192 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 A0A1B0GTH9 108 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 A0A1B0GTI1 187 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TMEM269A0A1B0GVZ9 245 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 LOC107986453A0A1B0GWG9 222 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CEACAM18A8MTB9 384 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TMEM14DPA8MWL7 114 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZNF736B4DX44 427 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 KRBOX1C9JBD0 128 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZNF878C9JN71 531 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 H7C1C5 153 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 NTN3O00634 580 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 TP53I11O14683 189 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 BET1O15155 118 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZNHIT1O43257 154 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 TSC22D2O75157 780 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 RP2O75695 350 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 OR2F2O95006 317 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 VAMP5O95183 116 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 MPC2O95563 127 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CYB5AP00167 134 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 PNPP00491 289 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 IGHG1P01857 330 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 APOC1P02654 83 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CD3DP04234 171 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 H2BFMP0C1H6 154 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ACSM4P0C7M7 580 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ZNF735P0CB33 412 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 FAM106CPP0CH98 169 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 MYOD1P15172 320 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CCL1P22362 96 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 LAP3P28838 519 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 ALDH3B1P43353 468 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CBX5P45973 191 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 EFNA3P52797 238 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 CRIP2P52943 208 aaPredicted RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 TAS2R31P59538 309 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 SNRPEP62304 92 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 LSM6P62312 80 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 LCN6P62502 163 aa3.21□□□□□ -1.9
CAST-242ENST00000515063 RPS15P62841 145 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 RPS27AP62979 156 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 UBA52P62987 128 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 GRB2P62993 217 aaKnown RBP3.21□□□□□ -1.9
CAST-242ENST00000515063 DCDP81605 110 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms