RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 LHX5Q9H2C1 402 aa3.19□□□□□ -1.9
CALCOCO2-222ENST00000514006 ZNF430Q9H8G1 570 aaPredicted RBP3.19□□□□□ -1.9
CALCOCO2-222ENST00000514006 PARVGQ9HBI0 331 aa3.19□□□□□ -1.9
CALCOCO2-222ENST00000514006 SCN1AP35498 2009 aa3.19□□□□□ -1.9
CALCOCO2-222ENST00000514006 SVILO95425 2214 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 TOX3O15405 576 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 E2F6O75461 281 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 MED6O75586 246 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 LIMS3P0CW19 117 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 LIMS4P0CW20 117 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 IL1RNP18510 177 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 PSMB9P28065 219 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 CCL23P55773 120 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 RHOAP61586 193 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 BAXQ07812 192 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 DMC1Q14565 340 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 C10orf107Q8IVU9 208 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 SLC25A29Q8N8R3 303 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 OR5M1Q8NGP8 315 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 ACTL9Q8TC94 416 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 FAM45AQ8TCE6 357 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 PPWD1Q96BP3 646 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 BIRC8Q96P09 236 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 APOL4Q9BPW4 351 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 ZNF649Q9BS31 505 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 DCUN1D5Q9BTE7 237 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 VCXQ9H320 206 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 WDR54Q9H977 334 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 RDH14Q9HBH5 336 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 RBM22Q9NW64 420 aaKnown RBP eCLIP3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 C21orf62Q9NYP8 219 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 NKIRAS1Q9NYS0 192 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 FBXL3Q9UKT7 428 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 INSIG2Q9Y5U4 225 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 PTPRTO14522 1441 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 TNS2Q63HR2 1409 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 IGSF9BQ9UPX0 1349 aa3.18□□□□□ -1.9
CALCOCO2-222ENST00000514006 IGLV3-16A0A075B6K0 115 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 LOC102724200A0A096LPH7 203 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 CENPVL3A0A0U1RRI6 287 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 A0A1W2PRG6 482 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 TMEM72A0PK05 275 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 GOLGA6L10A6NI86 522 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 UPK1AO00322 258 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 RAB36O95755 333 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 MAS1P04201 325 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 ZNF3P17036 446 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 BNIP2Q12982 314 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 CLEC12AQ5QGZ9 265 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 Q5W150 140 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 FAM231DQ6ZW35 169 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 UBALD2Q8IYN6 164 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 RNF10Q8N5U6 811 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 LINC00337Q8N6G1 96 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 Q8N9L7 120 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 OR9A2Q8NGT5 310 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 DYNC2LI1Q8TCX1 351 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 CPNE4Q96A23 557 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 SLC25A46Q96AG3 418 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 L3HYPDHQ96EM0 354 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 PGLYRP3Q96LB9 341 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 DRC3Q9H069 523 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 TAS2R13Q9NYV9 303 aa3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 YTHDF2Q9Y5A9 579 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 V9GYY5 206 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-222ENST00000514006 MYO10Q9HD67 2058 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 LOC389332A0A1B0GUA5 103 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 PRAMEF26H0Y7S4 382 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 MPZL2O60487 215 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 NIPSNAP2O75323 286 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 OR2A4O95047 310 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 CCNE2O96020 404 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 CD74P04233 296 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 IGKV5-2P06315 115 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 CISD3P0C7P0 127 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 ZNF35P13682 527 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 PVALBP20472 110 aaPredicted RBP3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 TSPOP30536 169 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 LGALS7P47929 136 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 TAS2R43P59537 309 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 RAB8AP61006 207 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 HBG1P69891 147 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 HBG2P69892 147 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 ZNF404Q494X3 552 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 TIMM23BQ5SRD1 257 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 KCTD16Q68DU8 428 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 LAMTOR1Q6IAA8 161 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 PDPNQ86YL7 162 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 FUNDC1Q8IVP5 155 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 ENTHD1Q8IYW4 607 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 ORMDL3Q8N138 153 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 SLC26A10Q8NG04 563 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 UBALD1Q8TB05 177 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 FMC1Q96HJ9 113 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 OR2A7Q96R45 310 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 ASB7Q9H672 318 aa3.16□□□□□ -1.9
CALCOCO2-222ENST00000514006 PARP11Q9NR21 331 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms