RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 CD2P06729 351 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 MMP9P14780 707 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 C21orf33P30042 268 aaPredicted RBP13.13□□□□□ -0.31
DDX41-214ENST00000512334 HILS1P60008 231 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 IZUMO2Q6UXV1 221 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 PHC2Q8IXK0 858 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 CMTM4Q8IZR5 234 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 ZFP41Q8N8Y5 198 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 LY6G5BQ8NDX9 201 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 OR5D18Q8NGL1 313 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 RGP1Q92546 391 aaPredicted RBP13.13□□□□□ -0.31
DDX41-214ENST00000512334 SMIM19Q96E16 107 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 SIRPDQ9H106 197 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 ZNF281Q9Y2X9 895 aa13.13□□□□□ -0.31
DDX41-214ENST00000512334 ATRQ13535 2644 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 PTGES3LE9PB15 166 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 OGG1O15527 345 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 ANGPTL7O43827 346 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 MT-ND2P03891 347 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 BCL3P20749 454 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 PDZK1IP1Q13113 114 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 PDCD1Q15116 288 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 C6orf141Q5SZD1 244 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 FIP1L1Q6UN15 594 aaKnown RBP13.12□□□□□ -0.31
DDX41-214ENST00000512334 BRD3OSQ6XYD6 125 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 VMO1Q7Z5L0 202 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 Q8IYB0 196 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 SIGLECL1Q8N7X8 197 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
DDX41-214ENST00000512334 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 LHX4Q969G2 390 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 C19orf24Q9BVV8 132 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 RBFOX1Q9NWB1 397 aaKnown RBP13.12□□□□□ -0.31
DDX41-214ENST00000512334 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 KPTNQ9Y664 436 aa13.12□□□□□ -0.31
DDX41-214ENST00000512334 MAGEB3O15480 346 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 ATP6V1G2O95670 118 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 CALCBP10092 127 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 RAB3AP20336 220 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 NPBWR2P48146 333 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 SNU13P55769 128 aaKnown RBP13.11□□□□□ -0.31
DDX41-214ENST00000512334 WNT4P56705 351 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 TAS2R43P59537 309 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 COL10A1Q03692 680 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 RUSC1-AS1Q66K80 236 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 DMKNQ6E0U4 476 aaPredicted RBP13.11□□□□□ -0.31
DDX41-214ENST00000512334 RNF144BQ7Z419 303 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 PDZD9Q8IXQ8 264 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 FAM58AQ8N1B3 248 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 C8orf46Q8TAG6 207 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 GHSRQ92847 366 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 MYDGFQ969H8 173 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 TMEM106AQ96A25 262 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 FKBP14Q9NWM8 211 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 IL36RNQ9UBH0 155 aa13.11□□□□□ -0.31
DDX41-214ENST00000512334 SOX21Q9Y651 276 aaPredicted RBP13.11□□□□□ -0.31
DDX41-214ENST00000512334 TRBV23-1A0A0A0MS06 115 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 CENPVL3A0A0U1RRI6 287 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 TRIM77I1YAP6 450 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 ALX3O95076 343 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 TK1P04183 234 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 CDK1P06493 297 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 CHRM2P08172 466 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 TMEM225BP0DP42 221 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 PRKACAP17612 351 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 MYF6P23409 242 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 HSPA13P48723 471 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 BLMHQ13867 455 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 KISS1Q15726 138 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 C9orf139Q6ZV77 190 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 SATL1Q86VE3 508 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 KIR3DL3Q8N743 410 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 NANOGP1Q8N7R0 232 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 CPNE2Q96FN4 548 aaPredicted RBP13.1□□□□□ -0.31
DDX41-214ENST00000512334 DMRTB1Q96MA1 342 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 ZNF48Q96MX3 618 aaPredicted RBP13.1□□□□□ -0.31
DDX41-214ENST00000512334 GPER1Q99527 375 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 ANKRD60Q9BZ19 345 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 C19orf12Q9NSK7 152 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 GLS2Q9UI32 602 aa13.1□□□□□ -0.31
DDX41-214ENST00000512334 IGKV1-12A0A0C4DH73 117 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 MDFIC2A0A1B0GVS7 189 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 HAND1O96004 215 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 IGKV1D-12P01611 117 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 DUSP1P28562 367 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 BPIFB3P59826 476 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 RPL31P62899 125 aaKnown RBP13.09□□□□□ -0.31
DDX41-214ENST00000512334 PPP3R1P63098 170 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 PRB3Q04118 309 aaPredicted RBP13.09□□□□□ -0.31
DDX41-214ENST00000512334 BAMBIQ13145 260 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 YIF1BQ5BJH7 314 aa13.09□□□□□ -0.31
DDX41-214ENST00000512334 OR4M1Q8NGD0 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms