RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 FOXO1Q12778 655 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 SPEM1Q8N4L4 309 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF485Q8NCK3 441 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 RNF2Q99496 336 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF2Q9BSG1 426 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 WDR61Q9GZS3 305 aaKnown RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 CGGBP1Q9UFW8 167 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 KCND3Q9UK17 655 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 FOXJ3Q9UPW0 622 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 FUT9Q9Y231 359 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 DUXBA0A1W2PPF3 345 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 P2RY10O00398 339 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 PDE6DO43924 150 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 EIF4E2O60573 245 aaKnown RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 HOXC4P09017 264 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 LIMS3P0CW19 117 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 LIMS4P0CW20 117 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 TMEM201Q5SNT2 666 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 MYPOPQ86VE0 399 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 MISPQ8IVT2 679 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 NUDT10Q8NFP7 164 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 OR2T10Q8NGZ9 312 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 RNF133Q8WVZ7 376 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 NPAS1Q99742 590 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 PSMG3Q9BT73 122 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 FOXJ2Q9P0K8 574 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 AMDHD2Q9Y303 409 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 IGHV1OR15-9A0A0B4J2B8 117 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 SDCBPO00560 298 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 RRP8O43159 456 aaKnown RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 GLSO94925 669 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 COX6CP09669 75 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 RPL27P61353 136 aaKnown RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 C9orf135Q5VTT2 229 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 GLIPR1L1Q6UWM5 242 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 TRILQ7L0X0 811 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 LRFN3Q9BTN0 628 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 ADGRL4Q9HBW9 690 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 PIGLQ9Y2B2 252 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 A0A0B4J2E0 115 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 A0A1B0GX12 115 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 LILRA5A6NI73 299 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 CORTO00230 105 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 CST7O76096 145 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 SOD3P08294 240 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 HLXQ14774 488 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 RPEL1Q2QD12 228 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 OR8A1Q8NGG7 326 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 BCL2L2Q92843 193 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 MS4A7Q9GZW8 240 aaPredicted RBP9.69□□□□□ -0.86
CPNE4-209ENST00000512055 BANF2Q9H503 90 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 HRKO00198 91 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 SPINT2O43291 252 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 CRYBB2P43320 205 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 EDDM3BP56851 147 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 BPIFB3P59826 476 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 LURAP1LQ8IV03 231 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 Q9N2K0 584 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 PSENENQ9NZ42 101 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 HSF4Q9ULV5 492 aa9.69□□□□□ -0.86
CPNE4-209ENST00000512055 ALPK2Q86TB3 2170 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 TCRBV16S1A1N1A0A5B0 115 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 OPN1MWP04001 364 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 OPN1MW2P0DN77 364 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 OPN1MW3P0DN78 364 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 ZAR1Q86SH2 424 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 PIGTQ969N2 578 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 C2orf50Q96LR7 162 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 LHX9Q9NQ69 397 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 TIMM9Q9Y5J7 89 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 SKP2Q13309 424 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 H1FNTQ75WM6 255 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-209ENST00000512055 MORN4Q8NDC4 146 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 RASL12Q9NYN1 266 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 PIPOXQ9P0Z9 390 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 CHD5Q8TDI0 1954 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 A0A1W2PNR3 127 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 DSCR3O14972 297 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 HLA-DRB3P79483 266 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 PRTGQ2VWP7 1150 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 TMEM52Q8NDY8 209 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 KTI12Q96EK9 354 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-209ENST00000512055 MOGAT1Q96PD6 335 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 WFDC6Q9BQY6 131 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 LAT2Q9GZY6 243 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 CDRT15L2A8MXV6 281 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 MT-ATP6P00846 226 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 ZGLP1P0C6A0 271 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 POU3F2P20265 443 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-209ENST00000512055 GAMTQ14353 236 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 DGAT2L7PQ6IED9 249 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 ARIH2OSQ8N7S6 290 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 MVB12AQ96EY5 273 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 GMPPAQ96IJ6 420 aaPredicted RBP9.68□□□□□ -0.86
CPNE4-209ENST00000512055 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
CPNE4-209ENST00000512055 FAM206AQ9NX38 181 aa9.68□□□□□ -0.86
CPNE4-209ENST00000512055 MED29Q9NX70 200 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms