RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SERPINA12Q8IW75 414 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 MKXQ8IYA7 352 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 CMTM4Q8IZR5 234 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 C11orf42Q8N5U0 333 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 PARP16Q8N5Y8 322 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF485Q8NCK3 441 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM185AQ8NFB2 350 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 RPS4Y2Q8TD47 263 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 NRG4Q8WWG1 115 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 SLAMF9Q96A28 289 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 SPSB1Q96BD6 273 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 ELL3Q9HB65 397 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 ONECUT1Q9UBC0 465 aa13.25□□□□□ -0.29
PDLIM5-216ENST00000511767 TENM1Q9UKZ4 2725 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 MDFIC2A0A1B0GVS7 189 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 K7N7A8 449 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 TK1P04183 234 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 CHRM2P08172 466 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 COMPP49747 757 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 ST3GAL4Q11206 333 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 LHFPL2Q6ZUX7 228 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 C8orf59Q8N0T1 100 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 OR5D14Q8NGL3 314 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 GATAD2BQ8WXI9 593 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 OPALINQ96PE5 141 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 FAM234AQ9H0X4 552 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 UNKLQ9H9P5 680 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 NOX4Q9NPH5 578 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 OR14J1Q9UGF5 321 aa13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 EXOSC1Q9Y3B2 195 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-216ENST00000511767 IGKV1-12A0A0C4DH73 117 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 DNAJC9-AS1A6NH13 148 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 RNASEK-C17orf49H0YIS7 233 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 M0R1W7 72 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 SLC1A7O00341 560 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 SPRY1O43609 319 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF737O75373 536 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 LALBAP00709 142 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 IGKV1D-12P01611 117 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 CAPZA1P52907 286 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 DLX1P56177 255 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 COL10A1Q03692 680 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 PRB3Q04118 309 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF529Q6P280 563 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 PDZD9Q8IXQ8 264 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 FAM58AQ8N1B3 248 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 OR13C9Q8NGT0 318 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 RGP1Q92546 391 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 SPACA5Q96QH8 159 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 COMMD4Q9H0A8 199 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 SIRT7Q9NRC8 400 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 C19orf12Q9NSK7 152 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 PSORS1C1Q9UIG5 152 aa13.23□□□□□ -0.29
PDLIM5-216ENST00000511767 TMEM82A0PJX8 343 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 H0YJX3 145 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 XPNPEP2O43895 674 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 PIPP12273 146 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 BCL3P20749 454 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 C21orf33P30042 268 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 CDK5R1Q15078 307 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 ASPHD2Q6ICH7 369 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 HCP5Q6MZN7 132 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 C16orf87Q6PH81 154 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 Q8IYB0 196 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 OR4M1Q8NGD0 313 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 OR52N1Q8NH53 320 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 TBC1D15Q8TC07 691 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 RBFOX1Q9NWB1 397 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 CHCHD3Q9NX63 227 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 CNOT2Q9NZN8 540 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 DHDHQ9UQ10 334 aa13.22□□□□□ -0.29
PDLIM5-216ENST00000511767 A0A1W2PQ09 198 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 HOXA3O43365 443 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 ANGPTL7O43827 346 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 CYB5AP00167 134 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 HKR1P10072 659 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 CALCBP10092 127 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 MYL12AP19105 171 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 DUSP1P28562 367 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 POU3F4P49335 361 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 RPL31P62899 125 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 ZNF146Q15072 292 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 KISS1Q15726 138 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 DMKNQ6E0U4 476 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 SAXO1Q8IYX7 474 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 BPIFB6Q8NFQ5 453 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 OR52N4Q8NGI2 321 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 OR5D13Q8NGL4 314 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 GPR148Q8TDV2 347 aa13.21□□□□□ -0.29
PDLIM5-216ENST00000511767 GHSRQ92847 366 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms