RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 RNF148Q8N7C7 305 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 OR6N2Q8NGY6 317 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 OR2T27Q8NH04 317 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 OTOSQ8NHW6 89 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 RPS4Y2Q8TD47 263 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 AQP3Q92482 292 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 HIST1H2AAQ96QV6 131 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 DGCR6LQ9BY27 220 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 MYLK2Q9H1R3 596 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 CMC2Q9NRP2 79 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 TBC1D23Q9NUY8 699 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 USE1Q9NZ43 259 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 PITPNC1Q9UKF7 332 aa6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
COL4A3BP-206ENST00000508809 A0A0U1RQV5 110 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR5B21A6NL26 309 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 ARPC2O15144 300 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 NOS1APO75052 506 aaPredicted RBP6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 TMEM127O75204 238 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 IGLV3-1P01715 115 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 RBP4P02753 201 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 LYNP07948 512 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 ATP6V1B1P15313 513 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 H2AFXP16104 143 aaPredicted RBP6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 CCL3L1P16619 93 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF3P17036 446 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 MAGEA2P43356 314 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 CAPZA1P52907 286 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 KRTAP10-11P60412 298 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 EGFEM1PQ0D2K5 195 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF273Q14593 569 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF626Q68DY1 528 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 C11orf87Q6NUJ2 197 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 TMEM219Q86XT9 240 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 POC1AQ8NBT0 407 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR11H6Q8NGC7 330 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR8B12Q8NGG6 310 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 NSMCE2Q96MF7 247 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 LYSTQ99698 3801 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 NIPAL2Q9H841 368 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 MED20Q9H944 212 aa6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
COL4A3BP-206ENST00000508809 WI2-2373I1.2A0A1W2PRP0 233 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 FAM183AA6NL82 134 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 RIIAD1A6NNX1 92 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 SLC1A7O00341 560 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 CCNB2O95067 398 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 SCAF4O95104 1147 aaKnown RBP6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 SLPIP03973 132 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 TK1P04183 234 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 PGA5P0DJD9 388 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 ALOX5APP20292 161 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 COX7A1P24310 79 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 RIPPLY1Q0D2K3 151 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 SSX2Q16385 188 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 MICAQ29983 383 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 SMIM21Q3B7S5 101 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 TCTEX1D4Q5JR98 221 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 CEP78Q5JTW2 689 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 LCN8Q6JVE9 175 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 HAGHLQ6PII5 290 aaPredicted RBP6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF782Q6ZMW2 699 aaPredicted RBP6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 TRPM8Q7Z2W7 1104 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 AQP11Q8NBQ7 271 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR5AU1Q8NGC0 362 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR4M1Q8NGD0 313 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR13D1Q8NGV5 346 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR5M11Q96RB7 305 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 OR8B4Q96RC9 309 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 MUC13Q9H3R2 512 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 HES4Q9HCC6 221 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 ABCB10Q9NRK6 738 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 ARMC1Q9NVT9 282 aa6.88□□□□□ -1.31
COL4A3BP-206ENST00000508809 K7N7A8 449 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 F2RL2O00254 374 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 SYNGR1O43759 233 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 SOX14O95416 240 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 DUS4LO95620 317 aaKnown RBP6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 SCGB1D2O95969 90 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 ALDOBP05062 364 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 ARG1P05089 322 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF728P0DKX0 622 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 VDAC2P45880 294 aaPredicted RBP6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 ERVK11-1P61568 191 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 SLC35A2P78381 396 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 PPP1R8Q12972 351 aaKnown RBP6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 PLA1AQ53H76 456 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 DMRTC1Q5HYR2 192 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 DEFB121Q5J5C9 76 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 MINOS1Q5TGZ0 78 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 LCN1P1Q5VSP4 162 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 TMEM42Q69YG0 159 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 DEGS2Q6QHC5 323 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 MOB3CQ70IA8 216 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 ZNF573Q86YE8 665 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 PGAM4Q8N0Y7 254 aa6.87□□□□□ -1.31
COL4A3BP-206ENST00000508809 FAM81AQ8TBF8 368 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms