RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 BATF2Q8N1L9 274 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 ELMOD3Q96FG2 381 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 ARHGAP5-AS1Q96IT6 56 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 ZNF488Q96MN9 340 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 TLNRD1Q9H1K6 362 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 ZMAT3Q9HA38 289 aaKnown RBP13.61□□□□□ -0.23
NFKB1-207ENST00000508584 RHOFQ9HBH0 211 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 RBFOX1Q9NWB1 397 aaKnown RBP13.61□□□□□ -0.23
NFKB1-207ENST00000508584 ST3GAL6Q9Y274 331 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 RBMX2Q9Y388 322 aaKnown RBP13.61□□□□□ -0.23
NFKB1-207ENST00000508584 HIVEP3Q5T1R4 2406 aa13.61□□□□□ -0.23
NFKB1-207ENST00000508584 IGHV3-64DA0A0J9YX35 117 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 TMEM235A6NFC5 223 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 F8VVB4 439 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 F8VWA3 439 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 CDIPTO14735 213 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PLA2G10O15496 165 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 SPRY3O43610 288 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 ORC5O43913 435 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PTTG1O95997 202 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 LPLP06858 475 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 MELTFP08582 738 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 SERPINF1P36955 418 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 ARL6IP1Q15041 203 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 TAF9Q16594 264 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 TRIM16LQ309B1 348 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 NHLRC3Q5JS37 347 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PRAMEF6Q5VXH4 476 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 RTN4RL2Q86UN3 420 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 C11orf53Q8IXP5 236 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 CENPSQ8N2Z9 138 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 TOMM5Q8N4H5 51 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 MINDY2Q8NBR6 621 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 NEUROG1Q92886 237 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 SEH1LQ96EE3 360 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PIK3IP1Q96FE7 263 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PECRQ9BY49 303 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 CELSR2Q9HCU4 2923 aa13.6□□□□□ -0.23
NFKB1-207ENST00000508584 PCNX1Q96RV3 2341 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A10PA6NDY2 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A18PA6NE21 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A16PA6NEW6 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A20PA6NIJ5 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A8PA6NJQ4 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A7PA6NKC0 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 A6NLC8 198 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A22PA8MWA6 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A12PA8MX19 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A5PA8MXJ8 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A23PA8MXZ1 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 H7C417 338 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 MFNGO00587 321 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 GEMIN2O14893 280 aaKnown RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 RBBP9O75884 186 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 PTBP3O95758 552 aaKnown RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 PLAUP00749 431 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A15PP0C7V4 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A13PP0C7W8 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A14PP0C7W9 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM90A24PP0C7X0 464 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 GSTT2BP0CG30 244 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 PGA5P0DJD9 388 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 COX6B1P14854 86 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 PRKACAP17612 351 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 LOXP28300 417 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 SRP9P49458 86 aaKnown RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 OXA1LQ15070 435 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 PNLIPRP3Q17RR3 467 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 NKAPLQ5M9Q1 402 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 Q8IYB0 196 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 FAM58AQ8N1B3 248 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 EMG1Q92979 244 aaKnown RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 MEGF10Q96KG7 1140 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 COX4I2Q96KJ9 171 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 NRIP2Q9BQI9 281 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 C11orf54Q9H0W9 315 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 MTFP1Q9UDX5 166 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 ELF5Q9UKW6 265 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-207ENST00000508584 ZDHHC8Q9ULC8 765 aa13.59□□□□□ -0.23
NFKB1-207ENST00000508584 ECDO95905 644 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-207ENST00000508584 IGHV1-46P01743 117 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 TNFSF4P23510 183 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 APOBEC3AP31941 199 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-207ENST00000508584 SNU13P55769 128 aaKnown RBP13.58□□□□□ -0.24
NFKB1-207ENST00000508584 GNG2P59768 71 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 AP3S2P59780 193 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 ERVK11-1P61568 191 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 SSBP1Q04837 148 aaKnown RBP13.58□□□□□ -0.24
NFKB1-207ENST00000508584 KLF9Q13886 244 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-207ENST00000508584 MPPED2Q15777 294 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 SIGIRRQ6IA17 410 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 MZT2BQ6NZ67 158 aa13.58□□□□□ -0.24
NFKB1-207ENST00000508584 DCDC5Q6ZRR9 648 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms