RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 ADAM5Q6NVV9 412 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 Q6ZR03 302 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 DCDC5Q6ZRR9 648 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 BIVMQ86UB2 503 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM90A1Q86YD7 464 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM58AQ8N1B3 248 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FBXL14Q8N1E6 418 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 CENPSQ8N2Z9 138 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF843Q8N446 348 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 POC1AQ8NBT0 407 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SCCPDHQ8NBX0 429 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 OR2Z1Q8NG97 314 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 OR10AD1Q8NGE0 317 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 ENKURQ8TC29 256 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 EMG1Q92979 244 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 DVL3Q92997 716 aaPredicted RBP6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SEH1LQ96EE3 360 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 DHRS9Q9BPW9 319 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 SYT3Q9BQG1 590 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 NRIP2Q9BQI9 281 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 NICN1Q9BSH3 213 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PECRQ9BY49 303 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MRPL37Q9BZE1 423 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 EGLN1Q9GZT9 426 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 CHST6Q9GZX3 395 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MS4A5Q9H3V2 200 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 FN3KRPQ9HA64 309 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MSL2Q9HCI7 577 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 IFT46Q9NQC8 304 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 MTCH1Q9NZJ7 389 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 EDARQ9UNE0 448 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 CACNG2Q9Y698 323 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PRR14LQ5THK1 2151 aa6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 DIDO1Q9BTC0 2240 aaKnown RBP6.91□□□□□ -1.3
TOPBP1-202ENST00000503338 PRRC2CQ9Y520 2896 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 NBASA2RRP1 2371 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 A0A0A6YYD4 124 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 FAM240BA0A1B0GVZ2 78 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ANKRD20A5PA0PJZ0 165 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM235A6NFC5 223 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 F5H5P2 479 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 H0YL77 283 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 M0R233 179 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 CDIPTO14735 213 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 SH2D1BO14796 132 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 PLA2G10O15496 165 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 SYNGR1O43759 233 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 OR7C1O76099 320 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 NXPH2O95156 264 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 GRPP07492 148 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 AKAIN1P0CW23 69 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 GNB3P16520 340 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 PRKACAP17612 351 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 DTYMKP23919 212 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 GABRR1P24046 479 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 CHATP28329 748 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 NPBWR2P48146 333 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM50BP56557 158 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ERVK11-1P61568 191 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TNFAIP6P98066 277 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 MAB21L1Q13394 359 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ARFRP1Q13795 201 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 KLF9Q13886 244 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 MEF2DQ14814 521 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF146Q15072 292 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TESK1Q15569 626 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TAF9Q16594 264 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 MSMPQ1L6U9 139 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 SMIM21Q3B7S5 101 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ZNF672Q499Z4 452 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM255AQ5JRV8 349 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 PLAC9Q5JTB6 97 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 PLET1Q6UQ28 207 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 Q6ZNX1 250 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 LRP11Q86VZ4 500 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM229BQ8NBD8 167 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 DUSP18Q8NEJ0 188 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 OR11L1Q8NGX0 322 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ST8SIA4Q92187 359 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 GTF3AQ92664 365 aaKnown RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 HPS1Q92902 700 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 ARHGAP5-AS1Q96IT6 56 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 MEGF10Q96KG7 1140 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 TMEM204Q9BSN7 226 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 C11orf54Q9H0W9 315 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 RIMS4Q9H426 269 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 SEBOXQ9HB31 216 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 HES4Q9HCC6 221 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 FAIMQ9NVQ4 179 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 KLK11Q9UBX7 282 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 KLF2Q9Y5W3 355 aaPredicted RBP6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 NPTNQ9Y639 398 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 CADP27708 2225 aa6.9□□□□□ -1.3
TOPBP1-202ENST00000503338 hCG_1807616A0A1W2PRN6 198 aa6.89□□□□□ -1.31
TOPBP1-202ENST00000503338 ZSCAN5BA6NJL1 495 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms