RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	IL36RN	Q9UBH0	155 aa		18.72	■□□□□ 0.59
RAP1B-213	ENST00000501412	ADAM30	Q9UKF2	790 aa		18.72	■□□□□ 0.59
RAP1B-213	ENST00000501412	PPP1R3C	Q9UQK1	317 aa		18.72	■□□□□ 0.59
RAP1B-213	ENST00000501412		V9GYH0	126 aa		18.72	■□□□□ 0.59
RAP1B-213	ENST00000501412	hCG_1807616	A0A1W2PRN6	198 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	FOXI3	A8MTJ6	420 aa	Predicted RBP	18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	FAM25A	B3EWG3	89 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	FAM25C	B3EWG5	89 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	FAM25G	B3EWG6	89 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	RAB27B	O00194	218 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	WNT9B	O14905	357 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	EGR1	P18146	543 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	RBM11	P57052	281 aa	Known RBP	18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	PIGY	Q3MUY2	71 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	MOGAT2	Q3SYC2	334 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	FAM58A	Q8N1B3	248 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	TSC22D3	Q99576	134 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	SELENOI	Q9C0D9	397 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	WDR13	Q9H1Z4	485 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	DCAF16	Q9NXF7	216 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	CACNG2	Q9Y698	323 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	TPD52L2	O43399	206 aa	Known RBP	18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	CDK2	P24941	298 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	METAP1D	Q6UB28	335 aa	Predicted RBP	18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	S100A16	Q96FQ6	103 aa	Known RBP	18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	GAL3ST1	Q99999	423 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	RAB1B	Q9H0U4	201 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	ATG5	Q9H1Y0	275 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	TREM2	Q9NZC2	230 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	ZNF581	Q9P0T4	197 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	EXTL2	Q9UBQ6	330 aa		18.71	■□□□□ 0.59
RAP1B-213	ENST00000501412	UNC79	Q9P2D8	2635 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	SIGIRR	Q6IA17	410 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	ACP7	Q6ZNF0	438 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	DTX3	Q8N9I9	347 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	EMG1	Q92979	244 aa	Known RBP	18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	POM121	Q96HA1	1249 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	URM1	Q9BTM9	101 aa	Known RBP	18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	RNF7	Q9UBF6	113 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	ST3GAL6	Q9Y274	331 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	AKAP6	Q13023	2319 aa		18.7	■□□□□ 0.58
RAP1B-213	ENST00000501412	CELSR2	Q9HCU4	2923 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412		A0A0A6YYH2	397 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	METTL21EP	A6NDL7	271 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412		A6NJ64	397 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	XRCC3	O43542	346 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	NXPH2	O95156	264 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	PRKACA	P17612	351 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	CDKN1A	P38936	164 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	NEU4	Q8WWR8	484 aa	Predicted RBP	18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	SEH1L	Q96EE3	360 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	NUDT16L1	Q9BRJ7	211 aa	Known RBP	18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	RASL12	Q9NYN1	266 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	CENPE	Q02224	2701 aa		18.69	■□□□□ 0.58
RAP1B-213	ENST00000501412	IGHV1-69-2	A0A0G2JMI3	117 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	GEMIN2	O14893	280 aa	Known RBP	18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	SOCS1	O15524	211 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	CYB5R3	P00387	301 aa	Predicted RBP	18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	GLRA1	P23415	457 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	CPT2	P23786	658 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	MNDA	P41218	407 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	PTH2R	P49190	550 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	VEGFC	P49767	419 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	TMEM50B	P56557	158 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	ZNF146	Q15072	292 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM189A2	Q15884	450 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	ZNF79	Q15937	498 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	TAF9	Q16594	264 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	RTN4RL2	Q86UN3	420 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	IZUMO1	Q8IYV9	350 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	OR11L1	Q8NGX0	322 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	YIPF5	Q969M3	257 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	CYYR1	Q96J86	154 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	TMEM106B	Q9NUM4	274 aa		18.68	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A10P	A6NDY2	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A18P	A6NE21	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A16P	A6NEW6	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A20P	A6NIJ5	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A8P	A6NJQ4	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A7P	A6NKC0	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A22P	A8MWA6	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A12P	A8MX19	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A5P	A8MXJ8	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A23P	A8MXZ1	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	TMEM178B	H3BS89	294 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	CHRM2	P08172	466 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A15P	P0C7V4	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A13P	P0C7W8	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A14P	P0C7W9	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	FAM90A24P	P0C7X0	464 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	SSTR2	P30874	369 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	PITPNB	P48739	271 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	GMFB	P60983	142 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	MADCAM1	Q13477	382 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	IL13RA2	Q14627	380 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	SPANXN2	Q5MJ10	180 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	RAB12	Q6IQ22	244 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	OR56B1	Q8NGI3	324 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	OR10R2	Q8NGX6	335 aa		18.67	■□□□□ 0.58
RAP1B-213	ENST00000501412	S100Z	Q8WXG8	99 aa		18.67	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms