RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	RAD51D	O75771	328 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TNFSF13	O75888	250 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LYZL6	O75951	148 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TOX	O94900	526 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ECD	O95905	644 aa	Predicted RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NRAS	P01111	189 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CGA	P01215	116 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CHRM2	P08172	466 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HKR1	P10072	659 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	M6PR	P20645	277 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	COX5A	P20674	150 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TUBG1	P23258	451 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	IL32	P24001	234 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	KIR2DL3	P43628	341 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	POU3F4	P49335	361 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RBP2	P50120	134 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MMP15	P51511	669 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FUT6	P51993	359 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ATP1B3	P54709	279 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CASP6	P55212	293 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB25	P57735	213 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MRPS15	P82914	257 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FAM3A	P98173	230 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FOXF2	Q12947	444 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FOXI1	Q12951	378 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GPR176	Q14439	515 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	P2RY14	Q15391	338 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TMEM69	Q5SWH9	247 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CLVS2	Q5SYC1	327 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF57	Q68EA5	555 aa	Predicted RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	AWAT2	Q6E213	333 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RTL6	Q6ICC9	239 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ASPHD2	Q6ICH7	369 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAB12	Q6IQ22	244 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CLEC9A	Q6UXN8	241 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LHFPL2	Q6ZUX7	228 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	BHLHA15	Q7RTS1	189 aa	Predicted RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MRPL21	Q7Z2W9	205 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR2W3	Q7Z3T1	314 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MDP1	Q86V88	176 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ANGPTL5	Q86XS5	388 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	DOLPP1	Q86YN1	238 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C1orf174	Q8IYL3	243 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF101	Q8IZC7	436 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GABRG1	Q8N1C3	465 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ST6GALNAC3	Q8NDV1	305 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR4M2	Q8NGB6	313 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR52N4	Q8NGI2	321 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR51A2	Q8NGJ7	313 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR6F1	Q8NGZ6	308 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR2AE1	Q8NHA4	323 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	KCNG3	Q8TAE7	436 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FCAMR	Q8WWV6	532 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	LINC00476	Q8WZB0	136 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FAM46B	Q96A09	425 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RFT1	Q96AA3	541 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SPSB1	Q96BD6	273 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	BORCS8	Q96FH0	119 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HIST1H2AA	Q96QV6	131 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	C7orf50	Q9BRJ6	194 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SOX7	Q9BT81	388 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	URM1	Q9BTM9	101 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CHST5	Q9GZS9	411 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SLC22A4	Q9H015	551 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ATG5	Q9H1Y0	275 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TUBG2	Q9NRH3	451 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	KCNN3	Q9UGI6	736 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ING4	Q9UNL4	249 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF835	Q9Y2P0	537 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FAM215A	Q9Y5M1	114 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF407	Q9C0G0	2248 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	NSD1	Q96L73	2696 aa	Predicted RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PRRC2A	P48634	2157 aa	Known RBP	4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CNTRL	Q7Z7A1	2325 aa		4.54	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TRAV18	A0A075B6X5	111 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	TMEM272	A0A1B0GTI8	110 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	hCG_38984	A0A1B0GV85	526 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	FAM230A	A0A1W2PPH8	454 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325		A0A1W2PQ09	198 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	OR5H1	A6NKK0	313 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RNF212B	A8MTL3	300 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SULT1C2	O00338	296 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	EEF1E1	O43324	174 aa	Known RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	GMDS	O60547	372 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF780A	O75290	641 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CTAG2	O75638	210 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RBBP9	O75884	186 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	HLA-DQB1	P01920	261 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CCL2	P13500	99 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	SELE	P16581	610 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ZNF14	P17017	642 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	CDK2	P24941	298 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ERP29	P30040	261 aa	Known RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	APOBEC3A	P31941	199 aa	Predicted RBP	4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PRSS3	P35030	304 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	PTGFR	P43088	359 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	RAD52	P43351	418 aa		4.53	□□□□□ -1.68
HMGXB4-208	ENST00000498325	ALDH3B1	P43353	468 aa		4.53	□□□□□ -1.68

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