RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	EWSR1	Q01844	656 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TLE3	Q04726	772 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CT45A2	Q5DJT8	189 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	MALSU1	Q96EH3	234 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SMIM7	Q9BQ49	75 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAAP24	Q9BTP7	215 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CBY3	A6NI87	242 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FIGNL2	A6NMB9	653 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	HSPB6	O14558	160 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CD55	P08174	381 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	GUCA1A	P43080	201 aa	Predicted RBP	9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RTP5	Q14D33	572 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CEBPE	Q15744	281 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DNM1P34	Q6PK57	102 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C16orf47	Q6ZP98	133 aa	Predicted RBP	9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C1QL2	Q7Z5L3	287 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C5orf24	Q7Z6I8	188 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF695	Q8IW36	515 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	GPR137C	Q8N3F9	429 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	IL22RA1	Q8N6P7	574 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR1P1	Q8NH06	330 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR4X1	Q8NH49	305 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TMEM18	Q96B42	140 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TMEM208	Q9BTX3	173 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PPIAL4A	Q9Y536	164 aa		9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TDRD6	O60522	2096 aa	Known RBP	9.35	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TMED7-TICAM2	A0A0A6YYA0	188 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597		A0A1B0GUS0	222 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TTR	P02766	147 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ASAH2B	P0C7U1	165 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	MYOG	P15173	224 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	NKX2-1	P43699	371 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	BID	P55957	195 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RPS16	P62249	146 aa	Known RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF154	Q13106	437 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	COTL1	Q14019	142 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ISX	Q2M1V0	245 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TMEM52B	Q4KMG9	183 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR10A7	Q8NGE5	316 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	VSTM2L	Q96N03	204 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	NKX2-4	Q9H2Z4	354 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RRAGC	Q9HB90	399 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SUSD2	Q9UGT4	822 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PILRA	Q9UKJ1	303 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	IGKV1D-43	A0A0B4J1Z2	117 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SIAH2	O43255	324 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	GSTP1	P09211	210 aa	Known RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF16	P17020	682 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	HNF1A	P20823	631 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	GLIPR1	P48060	266 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF41	P51814	821 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	JOSD1	Q15040	202 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C1orf100	Q5SVJ3	147 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR2C3	Q8N628	320 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C11orf40	Q8WZ69	217 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF775	Q96BV0	537 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TBX15	Q96SF7	602 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PCGF1	Q9BSM1	259 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PLK3	Q9H4B4	646 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAM60A	Q9NP50	221 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PARD6A	Q9NPB6	346 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	TRAV36DV7	A0A075B6V5	113 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PRSS38	A1L453	326 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	HSD17B6	O14756	317 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	MSTN	O14793	375 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PNLIP	P16233	465 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FAH	P16930	419 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SPINK2	P20155	84 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	MPZ	P25189	248 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DUSP1	P28562	367 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	PMEL	P40967	661 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	OR1D4	P47884	311 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DYNLT3	P51808	116 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	CARD18	P57730	90 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FOXL2	P58012	376 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF266	Q14584	549 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF77	Q15935	545 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	C1QL4	Q86Z23	238 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	SCGB1C1	Q8TD33	95 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RLN3	Q8WXF3	142 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RAB24	Q969Q5	203 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	RSPRY1	Q96DX4	576 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	NOL4L	Q96MY1	436 aa	Predicted RBP	9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	FKBP11	Q9NYL4	201 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	DKKL1	Q9UK85	242 aa		9.34	□□□□□ -0.91
TRAPPC12-223	ENST00000497597	ZNF407	Q9C0G0	2248 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	MARCH11	A6NNE9	402 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597		B4DGG1	531 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	IFNA5	P01569	189 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	RPLP1	P05386	114 aa	Known RBP	9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	DBH	P09172	617 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	THBS4	P35443	961 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	CHRNA7	P36544	502 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	PLA2G5	P39877	138 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	OR3A1	P47881	315 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	UCP3	P55916	312 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	ZNF117	Q03924	483 aa		9.33	□□□□□ -0.92
TRAPPC12-223	ENST00000497597	PLCXD2	Q0VAA5	305 aa		9.33	□□□□□ -0.92

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