RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	ARPC1B	O15143	372 aa	Known RBP	13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	PEX14	O75381	377 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	AMY2A	P04746	511 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	TRAPPC2	P0DI81	140 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	TRAPPC2B	P0DI82	140 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	CBX5	P45973	191 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	PDCD1	Q15116	288 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	RBMS2	Q15434	407 aa	Known RBP	13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR8G1	Q15617	311 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	RNASE10	Q5GAN6	216 aa	Known RBP	13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	EMG1	Q92979	244 aa	Known RBP	13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	SLC6A7	Q99884	636 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	GINS4	Q9BRT9	223 aa		13.96	□□□□□ -0.18
HLA-A-208	ENST00000496081	LRP5L	A4QPB2	252 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081		J3QT63	122 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	MLNR	O43193	412 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	TIMM8A	O60220	97 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	RHBDL1	O75783	438 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	CCNK	O75909	580 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	HRH1	P35367	487 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	NKX6-1	P78426	367 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	MEF2D	Q14814	521 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	MSMP	Q1L6U9	139 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	NHLRC3	Q5JS37	347 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081		Q6ZR03	302 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	BPIFB2	Q8N4F0	458 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	GIMAP1	Q8WWP7	306 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF488	Q96MN9	340 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	SULT4A1	Q9BR01	284 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	BEX2	Q9BXY8	128 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	BEX1	Q9HBH7	125 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	SPEF1	Q9Y4P9	236 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	EPG5	Q9HCE0	2579 aa		13.95	□□□□□ -0.18
HLA-A-208	ENST00000496081	ERVH48-1	M5A8F1	160 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	PDCD6	O75340	191 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	CSN2	P05814	226 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	TBP	P20226	339 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF154	Q13106	437 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	NKPD1	Q17RQ9	610 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	BRICD5	Q6PL45	260 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	HOGA1	Q86XE5	327 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	SCCPDH	Q8NBX0	429 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR6F1	Q8NGZ6	308 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR4K15	Q8NH41	348 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	ST6GALNAC5	Q9BVH7	336 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	IL36RN	Q9UBH0	155 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	AK3	Q9UIJ7	227 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	OSGIN2	Q9Y236	505 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	PLEKHA6	Q9Y2H5	1048 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A10P	A6NDY2	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A18P	A6NE21	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A16P	A6NEW6	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A20P	A6NIJ5	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A8P	A6NJQ4	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A7P	A6NKC0	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A22P	A8MWA6	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A12P	A8MX19	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A5P	A8MXJ8	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A23P	A8MXZ1	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	DISC1	C4P0D8	188 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	ATP6V1G2-DDX39B	F2Z307	99 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	PYCARD-AS1	I3L0S3	204 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR7C1	O76099	320 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A15P	P0C7V4	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A13P	P0C7W8	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A14P	P0C7W9	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM90A24P	P0C7X0	464 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	CD40	P25942	277 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	GLRX	P35754	106 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	MECP2	P51608	486 aa	Known RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	SNU13	P55769	128 aa	Known RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	RRAS2	P62070	204 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	MICB	Q29980	383 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	IDO2	Q6ZQW0	420 aa		13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.94	□□□□□ -0.18
HLA-A-208	ENST00000496081	TMEM210	A6NLX4	147 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	PRSS44	E7EML9	344 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	CCL21	O00585	134 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	PMP2	P02689	132 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	THBD	P07204	575 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF250	P15622	560 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	FUT3	P21217	361 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	LRP11	Q86VZ4	500 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	BEST4	Q8NFU0	473 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	MAFIP	Q8WZ33	124 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	ST6GAL2	Q96JF0	529 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	MSL2	Q9HCI7	577 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	SLC2A8	Q9NY64	477 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	SCP2D1	Q9UJQ7	156 aa		13.93	□□□□□ -0.18
HLA-A-208	ENST00000496081	NBEA	Q8NFP9	2946 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	IGHV3-64D	A0A0J9YX35	117 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081		A0A1B0GWJ7	208 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	C3orf80	F5H4A9	247 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	CDIPT	O14735	213 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	PRAF2	O60831	178 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	GRP	P07492	148 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	PRKACA	P17612	351 aa		13.92	□□□□□ -0.18

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