RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 GDPD3Q7L5L3 318 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 REC114Q7Z4M0 266 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 OR4S1Q8NGB4 309 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 OR11H6Q8NGC7 330 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 TMEM163Q8TC26 289 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 SLC7A11Q9UPY5 501 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 POMPQ9Y244 141 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 F8VVB4 439 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 F8VWA3 439 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 GYG2O15488 501 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 XPNPEP2O43895 674 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 EMX1Q04741 257 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-203ENST00000494993 SSX6Q7RTT6 188 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 NDUFA11Q86Y39 141 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 OR8H2Q8N162 312 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 WIPF2Q8TF74 440 aaPredicted RBP17.8■□□□□ 0.44
HDDC3-203ENST00000494993 UTP4Q969X6 686 aaKnown RBP17.8■□□□□ 0.44
HDDC3-203ENST00000494993 CEP19Q96LK0 163 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 CADM1Q9BY67 442 aaKnown RBP17.8■□□□□ 0.44
HDDC3-203ENST00000494993 PRSS22Q9GZN4 317 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 MMP28Q9H239 520 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 PLEKHA1Q9HB21 404 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 KRT84Q9NSB2 600 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 MTCH1Q9NZJ7 389 aa17.8■□□□□ 0.44
HDDC3-203ENST00000494993 ZAR1LA6NP61 321 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 MITFO75030 526 aaPredicted RBP17.79■□□□□ 0.44
HDDC3-203ENST00000494993 RPP14O95059 124 aaKnown RBP17.79■□□□□ 0.44
HDDC3-203ENST00000494993 DYNLT3P51808 116 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 DYNC1I2Q13409 638 aaKnown RBP17.79■□□□□ 0.44
HDDC3-203ENST00000494993 UBE2V2Q15819 145 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 ODF4Q2M2E3 257 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 C12orf73Q69YU5 71 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 TCF23Q7RTU1 214 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 GID4Q8IVV7 300 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 YIPF7Q8N8F6 280 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 ZNF714Q96N38 554 aa17.79■□□□□ 0.44
HDDC3-203ENST00000494993 IGKV1-27A0A075B6S5 117 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 PIN1P1O15428 100 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 KRT8P05787 483 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 EPHA2P29317 976 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 MEF2CQ06413 473 aaPredicted RBP17.78■□□□□ 0.44
HDDC3-203ENST00000494993 OXLD1Q5BKU9 147 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 CATSPERDQ86XM0 798 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 SLAMF9Q96A28 289 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 R3HDM4Q96D70 268 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 SNX22Q96L94 193 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 IL4I1Q96RQ9 567 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 TBX5Q99593 518 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 CITED2Q99967 270 aaPredicted RBP17.78■□□□□ 0.44
HDDC3-203ENST00000494993 WNT10AQ9GZT5 417 aa17.78■□□□□ 0.44
HDDC3-203ENST00000494993 TMEM82A0PJX8 343 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 ADARB2-AS1A8MUL3 147 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 H3BSH0 61 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 SYT7O43581 403 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 GATBO75879 557 aaKnown RBP17.77■□□□□ 0.44
HDDC3-203ENST00000494993 FUT6P51993 359 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 OR12D2P58182 307 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 EDDM3AQ14507 147 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 OR4F17Q8NGA8 305 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 OR4F4Q96R69 305 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 CHST5Q9GZS9 411 aa17.77■□□□□ 0.44
HDDC3-203ENST00000494993 hADV38S2A0JD32 116 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 F2RL2O00254 374 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 PEX14O75381 377 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 INMTO95050 263 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 ACTA2P62736 377 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 ACTG2P63267 376 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 ACTC1P68032 377 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 ACTA1P68133 377 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 ARSJQ5FYB0 599 aaPredicted RBP17.76■□□□□ 0.43
HDDC3-203ENST00000494993 MINOS1Q5TGZ0 78 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 Q6ZS46 218 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 SLC25A26Q70HW3 274 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 EGFL6Q8IUX8 553 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 SLC7A6OSQ96CW6 309 aaPredicted RBP17.76■□□□□ 0.43
HDDC3-203ENST00000494993 BORCS8Q96FH0 119 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 OR5M11Q96RB7 305 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 WARS2Q9UGM6 360 aaKnown RBP17.76■□□□□ 0.43
HDDC3-203ENST00000494993 HILPDAQ9Y5L2 63 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 LINC00312Q9Y6C7 94 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 SESN1Q9Y6P5 492 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 MINOS1-NBL1R4GNA1 71 aa17.76■□□□□ 0.43
HDDC3-203ENST00000494993 DNAJC8O75937 253 aaPredicted RBP17.75■□□□□ 0.43
HDDC3-203ENST00000494993 JUNBP17275 347 aaPredicted RBP17.75■□□□□ 0.43
HDDC3-203ENST00000494993 BLCAPP62952 87 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 KDM4DQ6B0I6 523 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 ZNF676Q8N7Q3 588 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 TPRX1Q8N7U7 411 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 CCDC54Q8NEL0 328 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 MRAPQ8TCY5 172 aa17.75■□□□□ 0.43
HDDC3-203ENST00000494993 EMG1Q92979 244 aaKnown RBP17.75■□□□□ 0.43
HDDC3-203ENST00000494993 SEBOXQ9HB31 216 aaPredicted RBP17.75■□□□□ 0.43
HDDC3-203ENST00000494993 IGHV2-26A0A0B4J1V2 119 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 A0A1W2PQL4 384 aaPredicted RBP17.74■□□□□ 0.43
HDDC3-203ENST00000494993 METTL15A6NJ78 407 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 HAND1O96004 215 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 IGHA1P01876 353 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 OR2T7P0C7T2 308 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 PEX2P28328 305 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 VDAC2P45880 294 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms