RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	DSCR9	P59020	149 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	ERVK11-1	P61568	191 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	MICB	Q29980	383 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	BAIAP2L2	Q6UXY1	529 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	LRRC28	Q86X40	367 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-231	ENST00000494973	LRRC75A-AS1	Q8N1F1	130 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	MUC20	Q8N307	709 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-231	ENST00000494973	SAMD12	Q8N8I0	201 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	OR56B1	Q8NGI3	324 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	OR51T1	Q8NGJ9	327 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	C15orf40	Q8WUR7	153 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	CCL17	Q92583	94 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	RAB1C	Q92928	201 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	FAM46B	Q96A09	425 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	C1orf147	Q96MC9	270 aa	Predicted RBP	11.42	□□□□□ -0.58
APTX-231	ENST00000494973	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.42	□□□□□ -0.58
APTX-231	ENST00000494973	TM2D1	Q9BX74	207 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	DNTTIP1	Q9H147	329 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	HMG20A	Q9NP66	347 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	RHBDL2	Q9NX52	303 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	MTCH1	Q9NZJ7	389 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	COMMD3	Q9UBI1	195 aa		11.42	□□□□□ -0.58
APTX-231	ENST00000494973	IGKV1-12	A0A0C4DH73	117 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM272	A0A1B0GTI8	110 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM178B	H3BS89	294 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	LGALS8	O00214	317 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	NDUFS8	O00217	210 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	NDUFA2	O43678	99 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	TPPP	O94811	219 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	LHB	P01229	141 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	IGKV1D-12	P01611	117 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	PRKACA	P17612	351 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	ATP5J2	P56134	94 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	RBM11	P57052	281 aa	Known RBP	11.41	□□□□□ -0.58
APTX-231	ENST00000494973	TMEM33	P57088	247 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	RPS27A	P62979	156 aa	Known RBP	11.41	□□□□□ -0.58
APTX-231	ENST00000494973	QRFP	P83859	136 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	ACP7	Q6ZNF0	438 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	ZNF826P	Q6ZT77	177 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	GCSAM	Q8N6F7	178 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	CHST4	Q8NCG5	386 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	MBD6	Q96DN6	1003 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	S100A16	Q96FQ6	103 aa	Known RBP	11.41	□□□□□ -0.58
APTX-231	ENST00000494973	WDFY2	Q96P53	400 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	ABCG5	Q9H222	651 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	DIABLO	Q9NR28	239 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	NLK	Q9UBE8	527 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	ST3GAL6	Q9Y274	331 aa		11.41	□□□□□ -0.58
APTX-231	ENST00000494973	DYSF	O75923	2080 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PPIAL4E	A0A075B759	164 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	IGHV3-64D	A0A0J9YX35	117 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	OOEP	A6NGQ2	149 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	NKX6-3	A6NJ46	265 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PPIAL4D	F5H284	164 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PAH	P00439	452 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	SFTPB	P07988	381 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PPIAL4F	P0DN26	164 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PTH2R	P49190	550 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PDLIM4	P50479	330 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	UNC119	Q13432	240 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	ZNF146	Q15072	292 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	TEX36	Q5VZQ5	186 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	RNF144B	Q7Z419	303 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	C1QL2	Q7Z5L3	287 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PPP1R35	Q8TAP8	253 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973		Q96M66	194 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	SELENOI	Q9C0D9	397 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	IFT22	Q9H7X7	185 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	RBFOX1	Q9NWB1	397 aa	Known RBP	11.4	□□□□□ -0.58
APTX-231	ENST00000494973	PPIAL4A	Q9Y536	164 aa		11.4	□□□□□ -0.58
APTX-231	ENST00000494973	HRNR	Q86YZ3	2850 aa	Predicted RBP	11.4	□□□□□ -0.58
APTX-231	ENST00000494973	CHD3	Q12873	2000 aa	Known RBP	11.4	□□□□□ -0.59
APTX-231	ENST00000494973	FAM25A	B3EWG3	89 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	FAM25C	B3EWG5	89 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	FAM25G	B3EWG6	89 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	SH2D1B	O14796	132 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	RP2	O75695	350 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	GLA	P06280	429 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	MDH2	P40926	338 aa	Known RBP	11.39	□□□□□ -0.59
APTX-231	ENST00000494973	PMEL	P40967	661 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	NPBWR2	P48146	333 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	PITPNB	P48739	271 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	BTG1	P62324	171 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	CLEC2A	Q6UVW9	174 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	SPIC	Q8N5J4	248 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	TMEM104	Q8NE00	496 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	OR10K1	Q8NGX5	313 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	NEDD4L	Q96PU5	975 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	NKX3-1	Q99801	234 aa	Predicted RBP	11.39	□□□□□ -0.59
APTX-231	ENST00000494973	GAL3ST1	Q99999	423 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973	ATG5	Q9H1Y0	275 aa		11.39	□□□□□ -0.59
APTX-231	ENST00000494973		A0A0B4J203	849 aa		11.38	□□□□□ -0.59
APTX-231	ENST00000494973	OR2AT4	A6NND4	320 aa		11.38	□□□□□ -0.59
APTX-231	ENST00000494973	OR7C1	O76099	320 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-231	ENST00000494973	HAND1	O96004	215 aa		11.38	□□□□□ -0.59
APTX-231	ENST00000494973	CYB5R3	P00387	301 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-231	ENST00000494973	IGHV4-39	P01824	125 aa		11.38	□□□□□ -0.59
APTX-231	ENST00000494973	NR4A2	P43354	598 aa		11.38	□□□□□ -0.59
APTX-231	ENST00000494973	GPR6	P46095	362 aa	Predicted RBP	11.38	□□□□□ -0.59
APTX-231	ENST00000494973	KCNJ3	P48549	501 aa		11.38	□□□□□ -0.59

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