RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 LOC100653049A0A140TA62 436 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 KRBOX1C9JBD0 128 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 BPY2O14599 106 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 CHST10O43529 356 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 SERPINB7O75635 380 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 KRT34O76011 436 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 SCELO95171 688 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 TDP2O95551 362 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 CCNE2O96020 404 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 PAHP00439 452 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 HPRT1P00492 218 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 POLR2IP36954 125 aaKnown RBP2.51□□□□□ -2.01
SMC4-224ENST00000494612 RAD51Q06609 339 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 ZNF829Q3KNS6 432 aaPredicted RBP2.51□□□□□ -2.01
SMC4-224ENST00000494612 CHRFAM7AQ494W8 412 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 MLIPQ5VWP3 458 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 ULK3Q6PHR2 472 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 SPERTQ8NA61 448 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 LRRC75AQ8NAA5 344 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 INO80EQ8NBZ0 244 aaPredicted RBP2.51□□□□□ -2.01
SMC4-224ENST00000494612 TTLQ8NG68 377 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 OR4A15Q8NGL6 344 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 OR5AR1Q8NGP9 310 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 OR8K3Q8NH51 312 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 GHSRQ92847 366 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 JSRP1Q96MG2 331 aaPredicted RBP2.51□□□□□ -2.01
SMC4-224ENST00000494612 ZNF2Q9BSG1 426 aaPredicted RBP2.51□□□□□ -2.01
SMC4-224ENST00000494612 ING2Q9H160 280 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 ZC4H2Q9NQZ6 224 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 C8orf17Q9NRJ1 99 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 IFNKQ9P0W0 207 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 CABIN1Q9Y6J0 2220 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 LAMA4Q16363 1823 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 ZNF292O60281 2723 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 WDR87Q6ZQQ6 2873 aa2.51□□□□□ -2.01
SMC4-224ENST00000494612 SPEGQ15772 3267 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 CACNA1HO95180 2353 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 IGLV2-18A0A075B6J9 118 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 GSTTP1A0A1W2PQM5 241 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 TMEM120BA0PK00 339 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 ZBTB5O15062 677 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 SOCS1O15524 211 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 HSBP1O75506 76 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 RBBP9O75884 186 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 IGLV3-25P01717 112 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 PMCHP20382 165 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 TNFSF9P41273 254 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 HADHBP55084 474 aaKnown RBP2.5□□□□□ -2.01
SMC4-224ENST00000494612 GFERP55789 205 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 HTR4Q13639 388 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 CLLU1OSQ5K130 101 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 STUMQ69YW2 141 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 CMTM8Q8IZV2 173 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 OSR2Q8N2R0 312 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 ASCC1Q8N9N2 400 aaKnown RBP2.5□□□□□ -2.01
SMC4-224ENST00000494612 HAUS1Q96CS2 278 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 RMI2Q96E14 147 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 C19orf60Q96EN9 201 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 SGTBQ96EQ0 304 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 DOK1Q99704 481 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 TBL1YQ9BQ87 522 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 ENOPH1Q9UHY7 261 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 KPTNQ9Y664 436 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 RIF1Q5UIP0 2472 aaKnown RBP2.5□□□□□ -2.01
SMC4-224ENST00000494612 CACNA1GO43497 2377 aa2.5□□□□□ -2.01
SMC4-224ENST00000494612 NUP214P35658 2090 aaPredicted RBP2.49□□□□□ -2.01
SMC4-224ENST00000494612 GVINP1Q7Z2Y8 2422 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 FRYQ5TBA9 3013 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 TRAV40A0A0B4J280 105 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 A0A0J9YYE9 177 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 LOC100506127A0A0U1RQW1 187 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 A0A1B0GUH1 482 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 ZNF850A8MQ14 1090 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 NPPAP01160 153 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 TRBC1P01850 177 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 IL4P05112 153 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 ME2P23368 584 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 CD70P32970 193 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 GPR1P46091 355 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 FABP6P51161 128 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 XIAPP98170 497 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 ZNF33AQ06730 810 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 ALX1Q15699 326 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 Q3ZCU0 254 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
SMC4-224ENST00000494612 C6orf183Q5T699 404 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 SLC25A25Q6KCM7 469 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 HMGN2P46Q86SG4 172 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 TCAIMQ8N3R3 496 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 TRAM1L1Q8N609 369 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 C8orf31Q8N9H6 132 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 OR1J4Q8NGS1 313 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 OR13G1Q8NGZ3 307 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 RNF157Q96PX1 679 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 LZTS2Q9BRK4 669 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 CALN1Q9BXU9 219 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 SAMD10Q9BYL1 202 aa2.49□□□□□ -2.01
SMC4-224ENST00000494612 CHMP4BQ9H444 224 aaKnown RBP2.49□□□□□ -2.01
SMC4-224ENST00000494612 RRAGDQ9NQL2 400 aaPredicted RBP2.49□□□□□ -2.01
SMC4-224ENST00000494612 MCUBQ9NWR8 336 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 390.2 ms