RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 CCL15Q16663 113 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 UBE2SQ16763 222 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 CEACAM16Q2WEN9 425 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 CEACAM21Q3KPI0 293 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 SLC25A35Q3KQZ1 300 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ACTBL2Q562R1 376 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 GUSBP11Q6P575 273 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 BHLHA15Q7RTS1 189 aaPredicted RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 LINC01551Q86U37 167 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 TMEM256Q8N2U0 113 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF786Q8N393 782 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 TTLQ8NG68 377 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 OR4K2Q8NGD2 314 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 OR1L1Q8NH94 360 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 UBA3Q8TBC4 463 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 S100PBPQ96BU1 408 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 NEURL3Q96EH8 262 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 MRPL48Q96GC5 212 aaKnown RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 SMIM8Q96KF7 97 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 QKIQ96PU8 341 aaKnown RBP eCLIP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 SLC17A9Q9BYT1 436 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 ING2Q9H160 280 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 METTL8Q9H825 291 aaKnown RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 PARVGQ9HBI0 331 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 C8orf17Q9NRJ1 99 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 PRO0628Q9UI54 55 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 TBX21Q9UL17 535 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 PSMD13Q9UNM6 376 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 TMEM14AQ9Y6G1 99 aa2.74□□□□□ -1.97
CMSS1-207ENST00000494412 NPHP4O75161 1426 aaPredicted RBP2.74□□□□□ -1.97
CMSS1-207ENST00000494412 SUPT6HQ7KZ85 1726 aaKnown RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ELP1O95163 1332 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 C3P01024 1663 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 LRP6O75581 1613 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 IGLV4-69A0A075B6H9 119 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 IGHV3-72A0A0B4J1Y9 119 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 PRAMEF26H0Y7S4 382 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 CRXO43186 299 aaPredicted RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ADAP1O75689 374 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 IGLV2-8P01709 118 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TAC1P20366 129 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 MDKP21741 143 aaPredicted RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 IL3RAP26951 378 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 GTF2H1P32780 548 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TTPAP49638 278 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ACOT2P49753 483 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 PPP1CAP62136 330 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TMEM249Q2WGJ8 235 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 RNASE13Q5GAN3 156 aaKnown RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 PLEKHG7Q6ZR37 379 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 USP50Q70EL3 339 aaPredicted RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 FUNDC1Q8IVP5 155 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 NECAP1Q8NC96 275 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 OR5AK3PQ8NH89 298 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 SYNPRQ8TBG9 265 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 PHF10Q8WUB8 498 aaKnown RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TNFRSF14Q92956 283 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 HGDQ93099 445 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 NARS2Q96I59 477 aaKnown RBP2.73□□□□□ -1.97
CMSS1-207ENST00000494412 DCUN1D5Q9BTE7 237 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 DRC3Q9H069 523 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ASCL3Q9NQ33 180 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 DIABLOQ9NR28 239 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 SDHAF3Q9NRP4 125 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF355PQ9NSJ1 428 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 NKIRAS1Q9NYS0 192 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TAS2R13Q9NYV9 303 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 FBXL3Q9UKT7 428 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 RAB22AQ9UL26 194 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 CELA1Q9UNI1 258 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 DYSFO75923 2080 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 EFCAB5A4FU69 1503 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 ATRXP46100 2492 aa2.73□□□□□ -1.97
CMSS1-207ENST00000494412 TCOF1Q13428 1488 aaKnown RBP2.72□□□□□ -1.97
CMSS1-207ENST00000494412 ZNF233A6NK53 670 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 TOX3O15405 576 aaPredicted RBP2.72□□□□□ -1.97
CMSS1-207ENST00000494412 MPZL2O60487 215 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 NIPSNAP2O75323 286 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 ABCA8O94911 1581 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 HLA-DQA1P01909 254 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 IGKV5-2P06315 115 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 KRTAP1-4P0C5Y4 121 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 LIMS3P0CW19 117 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 LIMS4P0CW20 117 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 ME2P23368 584 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 SLC18A1P54219 525 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 RHOAP61586 193 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 C16orf72Q14CZ0 275 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 YIF1BQ5BJH7 314 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 RICTORQ6R327 1708 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 WDR86Q86TI4 376 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 C10orf107Q8IVU9 208 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 OR10G2Q8NGC3 310 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 ACTL9Q8TC94 416 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 APOL4Q9BPW4 351 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 MRPL20Q9BYC9 149 aaKnown RBP2.72□□□□□ -1.97
CMSS1-207ENST00000494412 WDR54Q9H977 334 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 RDH14Q9HBH5 336 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 EXOSC4Q9NPD3 245 aaKnown RBP2.72□□□□□ -1.97
CMSS1-207ENST00000494412 TRAPPC8Q9Y2L5 1435 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms