RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 OR5L1Q8NGL2 311 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 OR5M8Q8NGP6 311 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 OR51F2Q8NH61 342 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 OR5P3Q8WZ94 311 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 FAHD2AQ96GK7 314 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 CMSS1Q9BQ75 279 aaKnown RBP9.13□□□□□ -0.95
CLCN6-208ENST00000494028 PLEKHJ1Q9NW61 149 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 RCC2Q9P258 522 aaKnown RBP9.13□□□□□ -0.95
CLCN6-208ENST00000494028 IL36RNQ9UBH0 155 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 PROCRQ9UNN8 238 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 ST3GAL6Q9Y274 331 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 NOP16Q9Y3C1 178 aaKnown RBP9.13□□□□□ -0.95
CLCN6-208ENST00000494028 MPC1Q9Y5U8 109 aa9.13□□□□□ -0.95
CLCN6-208ENST00000494028 ANKRD30BLA7E2S9 258 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 SYNGR1O43759 233 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 WDR1O75083 606 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 TOXO94900 526 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 IGKV3-15P01624 115 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 CBR1P16152 277 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 PPP3CBP16298 524 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 HAAOP46952 286 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 NPY4RP50391 375 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 AADACL3Q5VUY0 350 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 OR2T2Q6IF00 324 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 LPCAT3Q6P1A2 487 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 WDR86Q86TI4 376 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 RPRMLQ8N4K4 120 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 OR5AP2Q8NGF4 316 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 OR5A2Q8NGI9 324 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 MITD1Q8WV92 249 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
CLCN6-208ENST00000494028 POM121Q96HA1 1249 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 FAAP24Q9BTP7 215 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 ST6GALNAC5Q9BVH7 336 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 TMPRSS13Q9BYE2 586 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 OPN3Q9H1Y3 402 aaPredicted RBP9.12□□□□□ -0.95
CLCN6-208ENST00000494028 C5orf66Q9H5L9 145 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 C12orf4Q9NQ89 552 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 EDARQ9UNE0 448 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 GPR132Q9UNW8 380 aa9.12□□□□□ -0.95
CLCN6-208ENST00000494028 CHD3Q12873 2000 aaKnown RBP9.12□□□□□ -0.95
CLCN6-208ENST00000494028 GTF3C1Q12789 2109 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 TRAV14DV4A0A0A6YYC5 116 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 PLSCR5A0PG75 271 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 OR5H14A6NHG9 310 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 IQCF6A8MYZ5 107 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 F8VVB4 439 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 F8VWA3 439 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 MKRN2OSH3BPM6 223 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 J3QT63 122 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SDCBPO00560 298 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CCSO14618 274 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 RGS11O94810 467 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 IGLV1-44P01699 117 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CRYABP02511 175 aaKnown RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CRHP06850 196 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 HOXC12P31275 282 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 PMELP40967 661 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 OR3A3P47888 321 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF81P51508 661 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ARPC4P59998 168 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 GNG3P63215 75 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SRSF4Q08170 494 aaKnown RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 NDUFA5Q16718 116 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 MPV17LQ2QL34 196 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 EIF2S3LQ2VIR3 472 aaKnown RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 LGALSLQ3ZCW2 172 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CHRFAM7AQ494W8 412 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ZNF660Q6AZW8 331 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 C11orf88Q6PI97 169 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 OVCH2Q7RTZ1 564 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 TMEM17Q86X19 198 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CXorf67Q86X51 503 aaPredicted RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SPACA3Q8IXA5 215 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 TERB2Q8NHR7 220 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SLC25A40Q8TBP6 338 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 STARD4Q96DR4 205 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ELMOD3Q96FG2 381 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 CCDC120Q96HB5 630 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 HS3ST6Q96QI5 342 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ADAT1Q9BUB4 502 aaKnown RBP9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 PKIBQ9C010 78 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 OR2J1Q9GZK6 312 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 HEXA-AS1Q9H8Q6 139 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 OBP2BQ9NPH6 170 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 PCDHB16Q9NRJ7 776 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 PLSCR4Q9NRQ2 329 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 SLC23A1Q9UHI7 598 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 ANXA10Q9UJ72 324 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 TP53TG5Q9Y2B4 290 aa9.11□□□□□ -0.95
CLCN6-208ENST00000494028 MED19A0JLT2 244 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 SLC22A5O76082 557 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 OR7C1O76099 320 aaPredicted RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 AGFG2O95081 481 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 SFT2D2O95562 160 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 DUS4LO95620 317 aaKnown RBP9.1□□□□□ -0.95
CLCN6-208ENST00000494028 CECR9P0C854 216 aa9.1□□□□□ -0.95
CLCN6-208ENST00000494028 RPS2P15880 293 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms