RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SMLR1H3BR10 107 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 H3BUI4 141 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 PDCD6O75340 191 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 IGLV1-44P01699 117 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 ZNF35P13682 527 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 FUT3P21217 361 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 UCNP55089 124 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 TMPRSS3P57727 454 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 FGF12P61328 243 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 CDK10Q15131 360 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 SPATA46Q5T0L3 261 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 TMED4Q7Z7H5 227 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 SLC25A42Q86VD7 318 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 C1orf174Q8IYL3 243 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-216ENST00000492977 NAXEQ8NCW5 288 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 MRGPRFQ96AM1 343 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 AK3Q9UIJ7 227 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 VSIG4Q9Y279 399 aa12.03□□□□□ -0.48
PTPN7-216ENST00000492977 FAM172BPA6NC97 362 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 IQCF6A8MYZ5 107 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 TRAPPC2LH3BP13 241 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 LILRA1O75019 489 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 OR2A4O95047 310 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 AGFG2O95081 481 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 GIPP09681 153 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-216ENST00000492977 BCL3P20749 454 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 CA6P23280 308 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 NPBWR2P48146 333 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 TDGF1P3P51864 188 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 TSPAN5P62079 268 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 IL24Q13007 206 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 GRK1Q15835 563 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 CHRFAM7AQ494W8 412 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 C1QTNF12Q5T7M4 302 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 NLRC3Q7RTR2 1065 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 OR1J1Q8NGS3 322 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 SLC25A40Q8TBP6 338 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 OR2A7Q96R45 310 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 MICU1Q9BPX6 476 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 CMSS1Q9BQ75 279 aaKnown RBP12.02□□□□□ -0.49
PTPN7-216ENST00000492977 SULT4A1Q9BR01 284 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 C1QTNF6Q9BXI9 259 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 PKIBQ9C010 78 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 PLK3Q9H4B4 646 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 RHOFQ9HBH0 211 aa12.02□□□□□ -0.49
PTPN7-216ENST00000492977 ZNF230Q9UIE0 474 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-216ENST00000492977 RAP2BP61225 183 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 IFITM2Q01629 132 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 MPPED2Q15777 294 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 OVCH2Q7RTZ1 564 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 LINC00596Q86U02 117 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 CISD2Q8N5K1 135 aaKnown RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 Q8NA96 180 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 OR2AK2Q8NG84 335 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 CCDC120Q96HB5 630 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 CYYR1Q96J86 154 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 RTL8AQ9BWD3 113 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 BCL2L14Q9BZR8 327 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 PPA2Q9H2U2 334 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 ZNF701Q9NV72 531 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 SLC25A15Q9Y619 301 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 ACACAQ13085 2346 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 PRRG2O14669 202 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 CECR9P0C854 216 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 GSTT2P0CG29 244 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 GLI4P10075 376 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 TAS2R31P59538 309 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 UBE2MP61081 183 aaKnown RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 PSG7Q13046 419 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 MPV17LQ2QL34 196 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 FAM76BQ5HYJ3 339 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 TIMM23BQ5SRD1 257 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 TMEM211Q6ICI0 200 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 HAGHLQ6PII5 290 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 ZNF474Q6S9Z5 364 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 LHFPL1Q86WI0 220 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 RPRMLQ8N4K4 120 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 C12orf45Q8N5I9 185 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 KLF14Q8TD94 323 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-216ENST00000492977 ASB13Q8WXK3 278 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 SLX1AQ9BQ83 275 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 EHFQ9NZC4 300 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 ZNF581Q9P0T4 197 aa12.01□□□□□ -0.49
PTPN7-216ENST00000492977 SPTBN2O15020 2390 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 LRP5LA4QPB2 252 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 J3QT63 122 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 MSTNO14793 375 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 RGS13O14921 159 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 OR7C1O76099 320 aaPredicted RBP12□□□□□ -0.49
PTPN7-216ENST00000492977 FCGR3AP08637 254 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 ZBTB25P24278 435 aa12□□□□□ -0.49
PTPN7-216ENST00000492977 DNASE1P24855 282 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms