RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 HAAOP46952 286 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PTH2RP49190 550 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PDZK1IP1Q13113 114 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 UNC119Q13432 240 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 OLFML2AQ68BL7 652 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF573Q86YE8 665 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 CALHM1Q8IU99 346 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ZNF611Q8N823 705 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 OR13G1Q8NGZ3 307 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 OR52I2Q8NH67 350 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 C15orf40Q8WUR7 153 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 FCAMRQ8WWV6 532 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 FAM46BQ96A09 425 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 MRPL24Q96A35 216 aaKnown RBP12□□□□□ -0.49
PDZRN3-210ENST00000492909 SYT3Q9BQG1 590 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ATG5Q9H1Y0 275 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 NKIRAS2Q9NYR9 191 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 MGAT4AQ9UM21 535 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ICE1Q9Y2F5 2266 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PLSCR5A0PG75 271 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 METTL21EPA6NDL7 271 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 SHISA9B4DS77 424 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ANGPTL7O43827 346 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PRAF2O60831 178 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PEX14O75381 377 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 CXCL3P19876 107 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 CDK2P24941 298 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 RSU1Q15404 277 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 ASCL4Q6XD76 172 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 Q6ZR03 302 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM104Q8NE00 496 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 PXT1Q8NFP0 134 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 OR51F2Q8NH61 342 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 MRPL37Q9BZE1 423 aaKnown RBP12□□□□□ -0.49
PDZRN3-210ENST00000492909 METTL9Q9H1A3 318 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 MSL2Q9HCI7 577 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 DIABLOQ9NR28 239 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 SLC23A1Q9UHI7 598 aa12□□□□□ -0.49
PDZRN3-210ENST00000492909 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 ANKRD20A5PA0PJZ0 165 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 A1L4Q6 167 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 VSTM5A8MXK1 200 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 H0YL77 283 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 MLNRO43193 412 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 CDC14BO60729 498 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 CRTAPO75718 401 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 MPIG6BO95866 241 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 SERPINA2P20848 420 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 FAM189A2Q15884 450 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM69Q5SWH9 247 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 SLC25A26Q70HW3 274 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 DMRTC2Q8IXT2 367 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 SPERTQ8NA61 448 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 ZSCAN4Q8NAM6 433 aaPredicted RBP11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 OR10AD1Q8NGE0 317 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 NPTNQ9Y639 398 aa11.99□□□□□ -0.49
PDZRN3-210ENST00000492909 XRCC3O43542 346 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 KDM4BO94953 1096 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 CYB5AP00167 134 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 CSTBP04080 98 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 MGMTP16455 207 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 ADIPOQQ15848 244 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 FAM76BQ5HYJ3 339 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 SFRP4Q6FHJ7 346 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 HAGHLQ6PII5 290 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 BIVMQ86UB2 503 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 MKXQ8IYA7 352 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 SAXO1Q8IYX7 474 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 OR10K1Q8NGX5 313 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 GCDHQ92947 438 aaPredicted RBP11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 GAL3ST1Q99999 423 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 OR51I2Q9H344 312 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 BANF2Q9H503 90 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 DLL4Q9NR61 685 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 IL36GQ9NZH8 169 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 TAAR3PQ9P1P4 343 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 SCP2D1Q9UJQ7 156 aa11.98□□□□□ -0.49
PDZRN3-210ENST00000492909 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 IGKV1-12A0A0C4DH73 117 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 A0A1W2PP11 408 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 LRP5LA4QPB2 252 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 A6NJ64 397 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 TMEM210A6NLX4 147 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 SIAH2O43255 324 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 SSNA1O43805 119 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 SCGNO76038 276 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 IGKV1D-12P01611 117 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 HPXP02790 462 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 OR4A8P0C604 315 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 TAS2R20P59543 309 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 NKPD1Q17RQ9 610 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 RAB12Q6IQ22 244 aa11.97□□□□□ -0.49
PDZRN3-210ENST00000492909 DNM1P46Q6ZS02 220 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms