RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF627Q7L945 461 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 BIVMQ86UB2 503 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF679Q8IYX0 411 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 FGFBP3Q8TAT2 258 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 IGFBPL1Q8WX77 278 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 NINJ1Q92982 152 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 MARC2Q969Z3 335 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 VRK1Q99986 396 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ELOVL3Q9HB03 270 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 KCNG2Q9UJ96 466 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 PURGQ9UJV8 347 aaKnown RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 IGHV1-18A0A0C4DH31 117 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 H7C2Y5 167 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 HS3ST1O14792 307 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 HLA-DQA2P01906 255 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 CELA3BP08861 270 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 B4GALT1P15291 398 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 CLRN1P58418 232 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 RPL27P61353 136 aaKnown RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 FMODQ06828 376 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 MEF2DQ14814 521 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 TAF13Q15543 124 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF672Q499Z4 452 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 TEX30Q5JUR7 227 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ATPAF1Q5TC12 328 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 BPIFB2Q8N4F0 458 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 NOXO1Q8NFA2 376 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 BPIFCQ8NFQ6 507 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 OR1J2Q8NGS2 313 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF519Q8TB69 540 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 KCNK17Q96T54 332 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 FOXB1Q99853 325 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 TINAGL1Q9GZM7 467 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 KCNK15Q9H427 330 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF230Q9UIE0 474 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-219ENST00000491747 GTF2A1LQ9UNN4 478 aa8.1□□□□□ -1.11
BRCA1-219ENST00000491747 MYO9AB2RTY4 2548 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 RAB19A4D1S5 217 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 MEGF11A6BM72 1044 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 NPIPB13A6NJU9 1138 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 FAM74A7A6NL05 159 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 DISC1C4P0D8 188 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 NPIPB4C9JG80 1138 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 M0QYG6 137 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 DHHO43323 396 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 ATG12O94817 140 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 IGHG1P01857 330 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 HLA-HP01893 362 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 CD74P04233 296 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 PATE4P0C8F1 98 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 HOXC12P31275 282 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 CENPAP49450 140 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 DAP3P51398 398 aaKnown RBP8.09□□□□□ -1.11
BRCA1-219ENST00000491747 UBE2NP61088 152 aaKnown RBP8.09□□□□□ -1.11
BRCA1-219ENST00000491747 ADAM8P78325 824 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 LRRC37A5PQ49AS3 106 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 SCGB2B2Q4G0G5 96 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 FAM74A3Q4VXF1 159 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 GLYATL3Q5SZD4 288 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 SLC18B1Q6NT16 456 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 KCTD18Q6PI47 426 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-219ENST00000491747 TMEM108Q6UXF1 575 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF813Q6ZN06 617 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 SSX8Q7RTT4 187 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 SKA3Q8IX90 412 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 SVBPQ8N300 66 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 INO80EQ8NBZ0 244 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-219ENST00000491747 TMEM185AQ8NFB2 350 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 PPP1R1CQ8WVI7 109 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 ZNF75AQ96N20 296 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 AMELYQ99218 206 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 PRRT1Q99946 306 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 ROS1P08922 2347 aa8.09□□□□□ -1.11
BRCA1-219ENST00000491747 E7EQL1 145 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 IGLV1-44P01699 117 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 HOXB1P14653 301 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 HLA-GP17693 338 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 FSTP19883 344 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PTAFRP25105 342 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 PRKXP51817 358 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF133P52736 654 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CAPZA1P52907 286 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 DEFB113Q30KQ7 82 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 OR2W3Q7Z3T1 314 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 MDP1Q86V88 176 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF584Q8IVC4 421 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 ZNF611Q8N823 705 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 THAP6Q8TBB0 222 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 TSNAXQ99598 290 aaKnown RBP8.08□□□□□ -1.12
BRCA1-219ENST00000491747 WDR13Q9H1Z4 485 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 OBP2BQ9NPH6 170 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 TMEM38BQ9NVV0 291 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 SLC2A8Q9NY64 477 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 KCNK7Q9Y2U2 307 aa8.08□□□□□ -1.12
BRCA1-219ENST00000491747 CELSR1Q9NYQ6 3014 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms