RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ZNF43P17038 809 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 CD38P28907 300 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 CDX1P47902 265 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-213ENST00000488973 CAMLGP49069 296 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 OR1D5P58170 312 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 DMRTC1Q5HYR2 192 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 C6orf201Q7Z4U5 140 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 NFAM1Q8NET5 270 aaPredicted RBP17.05■□□□□ 0.32
HMG20B-213ENST00000488973 OR1J1Q8NGS3 322 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 DTD1Q8TEA8 209 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 NCOR1P1Q9H4R4 102 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 ANXA10Q9UJ72 324 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 A0A0U1RQV5 110 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 LMO7DNF2Z398 122 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 MASP2O00187 686 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 LMO1P25800 156 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 SAPCD1Q5SSQ6 148 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 RPUSD3Q6P087 351 aaKnown RBP17.05■□□□□ 0.32
HMG20B-213ENST00000488973 SLC38A9Q8NBW4 561 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 PLEKHJ1Q9NW61 149 aa17.05■□□□□ 0.32
HMG20B-213ENST00000488973 IGLV3-32A0A0A0MS00 114 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1W2PR77 199 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 UMAD1C9J7I0 102 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 LSM6P62312 80 aaKnown RBP17.04■□□□□ 0.32
HMG20B-213ENST00000488973 PLXDC1Q8IUK5 500 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 IGHV1OR21-1A0A087WYE8 117 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 C5orf63A6NC05 138 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF726A6NNF4 738 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 MKRN2OSH3BPM6 223 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 SULT1A1P50225 295 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 PIGPP57054 158 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 SLC35A1P78382 337 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 TGIF1Q15583 401 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 Q6ZSR3 168 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 GALNT14Q96FL9 552 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 BSCL2Q96G97 398 aaPredicted RBP17.04■□□□□ 0.32
HMG20B-213ENST00000488973 PIGQQ9BRB3 760 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 ZPBPQ9BS86 351 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 PBDC1Q9BVG4 233 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 ELL3Q9HB65 397 aaPredicted RBP17.04■□□□□ 0.32
HMG20B-213ENST00000488973 WFDC1Q9HC57 220 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF160Q9HCG1 818 aa17.04■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF814B7Z6K7 855 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 OR5H8P0DN80 308 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 MAS1LP35410 378 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 FOXL2P58012 376 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 RAB1AP62820 205 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 CFHR1Q03591 330 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 TNFRSF9Q07011 255 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 TMEM187Q14656 261 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 NCMAPQ5T1S8 102 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 LRTM2Q8N967 370 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 STT3BQ8TCJ2 826 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 C10orf35Q96D05 121 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 Q96M66 194 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 RSRP1Q9BUV0 290 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 C20orf24Q9BUV8 137 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 PHF7Q9BWX1 381 aaPredicted RBP17.03■□□□□ 0.32
HMG20B-213ENST00000488973 SLC35B3Q9H1N7 401 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 NAA60Q9H7X0 242 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 GAR1Q9NY12 217 aaKnown RBP17.03■□□□□ 0.32
HMG20B-213ENST00000488973 ADAMTS20P59510 1910 aa17.03■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1W2PNR3 127 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 hCG_1809904A0A1W2PP81 198 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1W2PR64 198 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1W2PRV1 198 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 OPN1LWP04000 364 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 DAOP14920 347 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 GABRR1P24046 479 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 OR8G1Q15617 311 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 Q6ZS52 159 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 ANKRD37Q7Z713 158 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 TMEM156Q8N614 296 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 GNRHR2Q96P88 292 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 KCNJ16Q9NPI9 418 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 SEMA5BQ9P283 1151 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 ASXL3Q9C0F0 2248 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 A0A1B0GW64 132 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 FAHP16930 419 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 GNG10P50151 68 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 CDPF1Q6NVV7 123 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 CLEC9AQ6UXN8 241 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 UNQ6494/PRO21346Q6UXR6 183 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 HIST2H3AQ71DI3 136 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 FAM24BQ8N5W8 94 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 ZNF501Q96CX3 271 aaPredicted RBP17.02■□□□□ 0.32
HMG20B-213ENST00000488973 R3HDM4Q96D70 268 aa17.02■□□□□ 0.32
HMG20B-213ENST00000488973 HDHD3Q9BSH5 251 aaPredicted RBP17.02■□□□□ 0.32
HMG20B-213ENST00000488973 RIMS4Q9H426 269 aaPredicted RBP17.02■□□□□ 0.32
HMG20B-213ENST00000488973 LOC102725191A0A1B0GVB3 256 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 TMEM238LA0A1B0GVL6 79 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 H7C1Q1 480 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 TLX3O43711 291 aaPredicted RBP17.01■□□□□ 0.31
HMG20B-213ENST00000488973 TMEM225BP0DP42 221 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 CD27P26842 260 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 PTGDSP41222 190 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 C1QL4Q86Z23 238 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 CCDC54Q8NEL0 328 aa17.01■□□□□ 0.31
HMG20B-213ENST00000488973 LFNGQ8NES3 379 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms