RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
CLIC4-202ENST00000488683 CTRB1P17538 263 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 TCN2P20062 427 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 ZNF84P51523 738 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 FAM189A2Q15884 450 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 GGNBP1Q5YKI7 109 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 CTRB2Q6GPI1 263 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 TIPARPQ7Z3E1 657 aaKnown RBP11□□□□□ -0.65
CLIC4-202ENST00000488683 SULF2Q8IWU5 870 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 SKA3Q8IX90 412 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 OR10AD1Q8NGE0 317 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 OR10D3Q8NH80 312 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 C2CD4CQ8TF44 421 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 SPTSSAQ969W0 71 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 PIGMQ9H3S5 423 aa11□□□□□ -0.65
CLIC4-202ENST00000488683 C14orf166Q9Y224 244 aaKnown RBP11□□□□□ -0.65
CLIC4-202ENST00000488683 ESPL1Q14674 2120 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 HKR1P10072 659 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 TGIF1Q15583 401 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 KIAA2026Q5HYC2 2103 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 H3F3CQ6NXT2 135 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 AAED1Q7RTV5 226 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 SUMF1Q8NBK3 374 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 OR52M1Q8NGK5 317 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 C2orf50Q96LR7 162 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 TMEM100Q9NV29 134 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 RCL1Q9Y2P8 373 aaKnown RBP10.99□□□□□ -0.65
CLIC4-202ENST00000488683 ZNF716A6NP11 495 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 IFNA2P01563 188 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 CD79AP11912 226 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 FOLR3P41439 243 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 EIF3IQ13347 325 aaKnown RBP10.99□□□□□ -0.65
CLIC4-202ENST00000488683 IGSF11Q5DX21 431 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 NSUN5P2Q63ZY6 315 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 MEX3BQ6ZN04 569 aaKnown RBP10.99□□□□□ -0.65
CLIC4-202ENST00000488683 CPEB3Q8NE35 698 aaKnown RBP10.99□□□□□ -0.65
CLIC4-202ENST00000488683 CMSS1Q9BQ75 279 aaKnown RBP10.99□□□□□ -0.65
CLIC4-202ENST00000488683 ANXA10Q9UJ72 324 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 PADI1Q9ULC6 663 aa10.99□□□□□ -0.65
CLIC4-202ENST00000488683 ZNF503-AS2A6NEH8 195 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 TDGF1P13385 188 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 GDF1P27539 372 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 RAC3P60763 192 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 RAB35Q15286 201 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 GPR137CQ8N3F9 429 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 OR5T2Q8NGG2 359 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 OR1F12Q8NHA8 337 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 SCGB3A2Q96PL1 93 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 AQP10Q96PS8 301 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 CDX2Q99626 313 aaPredicted RBP10.98□□□□□ -0.65
CLIC4-202ENST00000488683 PAPOLGQ9BWT3 736 aaKnown RBP10.98□□□□□ -0.65
CLIC4-202ENST00000488683 TAF9BQ9HBM6 251 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 TMEM38BQ9NVV0 291 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 FBXL17Q9UF56 701 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 ST3GAL6Q9Y274 331 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 FCGR2CP31995 323 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 NAAAQ02083 359 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 PLCXD3Q63HM9 321 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 BORCS8Q96FH0 119 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 WNT5BQ9H1J7 359 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 PARPBPQ9NWS1 579 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 PLA2G3Q9NZ20 509 aa10.98□□□□□ -0.65
CLIC4-202ENST00000488683 LRRC3CA6NJW4 275 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 FAM166BA8MTA8 275 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 NME2P1O60361 137 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 NRASP01111 189 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 P04436 131 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 FCGR3AP08637 254 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 OR8U9P0C7N5 309 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 EDN3P14138 238 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 RPL12P30050 165 aaKnown RBP10.97□□□□□ -0.65
CLIC4-202ENST00000488683 CD80P33681 288 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 PPP1R32Q7Z5V6 425 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 OR8U1Q8NH10 309 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 RNF141Q8WVD5 230 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 C20orf24Q9BUV8 137 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 SH3BGRL3Q9H299 93 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 MGAQ8IWI9 3026 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 OR7C1O76099 320 aaPredicted RBP10.97□□□□□ -0.65
CLIC4-202ENST00000488683 HLA-HP01893 362 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 TMEM33P57088 247 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 INTS12Q96CB8 462 aaKnown RBP10.97□□□□□ -0.65
CLIC4-202ENST00000488683 ZNF488Q96MN9 340 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 FOXB1Q99853 325 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 METTL9Q9H1A3 318 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 RHOFQ9HBH0 211 aa10.97□□□□□ -0.65
CLIC4-202ENST00000488683 COL27A1Q8IZC6 1860 aaPredicted RBP10.97□□□□□ -0.65
CLIC4-202ENST00000488683 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 OR6C6A6NF89 314 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 SRD5A2P31213 254 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 RPL35P42766 123 aaKnown RBP10.96□□□□□ -0.65
CLIC4-202ENST00000488683 FAM3AP98173 230 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 HOXA4Q00056 320 aaPredicted RBP10.96□□□□□ -0.65
CLIC4-202ENST00000488683 NHLH2Q02577 135 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 SURF2Q15527 256 aaPredicted RBP10.96□□□□□ -0.65
CLIC4-202ENST00000488683 HAGHLQ6PII5 290 aaPredicted RBP10.96□□□□□ -0.65
CLIC4-202ENST00000488683 SLC25A26Q70HW3 274 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 CLRN3Q8NCR9 226 aa10.96□□□□□ -0.65
CLIC4-202ENST00000488683 UBALD1Q8TB05 177 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms