RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 SVILO95425 2214 aa1.97□□□□□ -2.09
HMGB1P36-201ENST00000487709 ZNF233A6NK53 670 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 IQCF5A8MTL0 148 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 UPK2O00526 184 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 PRMT5O14744 637 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 SLC37A4O43826 429 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 ALOX12BO75342 701 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR2A4O95047 310 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OXTP01178 125 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF3P17036 446 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 LCN1P31025 176 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR12D2P58182 307 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 MLF1P58340 268 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 DSTNP60981 165 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 RPL31P62899 125 aaKnown RBP1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 FAM27D1Q5T7N8 215 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 FAM131AQ6UXB0 335 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 COPS6Q7L5N1 327 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 PID1Q7Z2X4 250 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 ITPRIPQ8IWB1 547 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR8A1Q8NGG7 326 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR6N2Q8NGY6 317 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF420Q8TAQ5 688 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 DDI1Q8WTU0 396 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 C18orf15Q96N68 181 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR2A7Q96R45 310 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 ACBD6Q9BR61 282 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 HINT2Q9BX68 163 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 NDEL1Q9GZM8 345 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 SDHAF3Q9NRP4 125 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 UBAP1Q9NZ09 502 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 RBMX2Q9Y388 322 aaKnown RBP1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 V9GYY9 64 aa1.96□□□□□ -2.1
HMGB1P36-201ENST00000487709 SDK2Q58EX2 2172 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 IZUMO1RA6ND01 250 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 C16orf90A8MZG2 172 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 RFXANKO14593 260 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 KCNK2O95069 426 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 SLC6A1P30531 599 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 GNRHRP30968 328 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 KCNJ3P48549 501 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TUFMP49411 452 aaKnown RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 PSG3Q16557 428 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 C18orf21Q32NC0 220 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF678Q5SXM1 525 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 KDM4DQ6B0I6 523 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 CLEC6AQ6EIG7 209 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TBPL2Q6SJ96 375 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 CA13Q8N1Q1 262 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 CCNYL1Q8N7R7 359 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZDHHC22Q8N966 263 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR2M7Q8NG81 312 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR4D6Q8NGJ1 314 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TVP23CQ96ET8 276 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 RILPQ96NA2 401 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 METTL26Q96S19 204 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 PEBP4Q96S96 227 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 GABRG3Q99928 467 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TM2D3Q9BRN9 247 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 LLPHQ9BRT6 129 aaKnown RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 SHANK2-AS3Q9BTD1 123 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 BBS2Q9BXC9 721 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 LHX5Q9H2C1 402 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 SLC38A1Q9H2H9 487 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 GOLPH3Q9H4A6 298 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 LINC00574Q9H8X3 128 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 NLE1Q9NVX2 485 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 DNAJC27Q9NZQ0 273 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TAC3Q9UHF0 121 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TFR2Q9UP52 801 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TRAPPC1Q9Y5R8 145 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 V9GYY5 206 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 C2orf16Q68DN1 1984 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 SHROOM3Q8TF72 1996 aa1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 ZNF608Q9ULD9 1512 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P36-201ENST00000487709 TSPOAP1O95153 1857 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 COL27A1Q8IZC6 1860 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 TRAV8-7A0A075B6U6 113 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 ANKRD20A5PA0PJZ0 165 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 GMNCA6NCL1 334 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 TRPC5OSA6NMA1 111 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 M0R1B8 84 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 CDK14O94921 469 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 S100A6P06703 90 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 IL12BP29460 328 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 ELF3P78545 371 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 IL5RAQ01344 420 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 MEF2CQ06413 473 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 STX3Q13277 289 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 TMEM69Q5SWH9 247 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 KCTD16Q68DU8 428 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 ASCL4Q6XD76 172 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 TMEM136Q6ZRR5 245 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 CYP4Z1Q86W10 505 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 C17orf78Q8N4C9 275 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR6K2Q8NGY2 324 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 OR51Q1Q8NH59 317 aa1.94□□□□□ -2.1
HMGB1P36-201ENST00000487709 CMTM2Q8TAZ6 248 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms