RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 LINC00597Q9H2U6 94 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 OR51J1Q9H342 316 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 PLEKHA1Q9HB21 404 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 SIRT7Q9NRC8 400 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 CTPS2Q9NRF8 586 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 ASF1BQ9NVP2 202 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 KCNIP1Q9NZI2 227 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 BTNL2Q9UIR0 455 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 CHD3Q12873 2000 aaKnown RBP2.52□□□□□ -2.01
UBR3-211ENST00000487689 OBSL1O75147 1896 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 STAB2Q8WWQ8 2551 aa2.52□□□□□ -2.01
UBR3-211ENST00000487689 IGHV1OR21-1A0A087WYE8 117 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 A0A1B0GW55 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 VGLL3A8MV65 326 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 C10orf142B7Z368 130 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 G3V3Y1 287 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 hCG_2039718K7EN88 272 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SLC17A2O00624 439 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 AQP9O43315 295 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SGCEO43556 437 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CDC40O60508 579 aaKnown RBP eCLIP2.51□□□□□ -2.01
UBR3-211ENST00000487689 ICOSLGO75144 302 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 TRAPPC6AO75865 159 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 OR5F1O95221 314 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 TNFAIP8O95379 198 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CATP04040 527 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 ARG1P05089 322 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L2P0CJ85 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L3P0CJ86 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L5P0CJ88 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L6P0CJ89 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L7P0CJ90 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SLC35E2P0CK97 266 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RAB4AP20338 218 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 AK4P27144 223 aaPredicted RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 ADORA2BP29275 332 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 GCKP35557 465 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RBM34P42696 430 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 CDKN2CP42773 168 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 KIR2DS2P43631 304 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 GSSP48637 474 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CEBPGP53567 150 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 VBP1P61758 197 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTA2P62736 377 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RPL32P62910 135 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTG2P63267 376 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTC1P68032 377 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTA1P68133 377 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ST3GAL4Q11206 333 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 KYAT1Q16773 422 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DEFB109BQ30KR1 87 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 BSXQ3C1V8 233 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 NSUN5P1Q3KNT7 163 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ZBED5Q49AG3 693 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 PIGGQ5H8A4 983 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 COQ5Q5HYK3 327 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 KLF17Q5JT82 389 aaPredicted RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTL10Q5JWF8 245 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 IDNKQ5T6J7 187 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 TPTE2P1Q5T6R2 138 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SDHAF4Q5VUM1 108 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 UBE2UQ5VVX9 321 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RESP18Q5W5W9 173 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 FRMPD2BQ6IN97 320 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 C11orf71Q6IPW1 123 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4L9Q6RFH8 374 aaPredicted RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 Q6ZN92 141 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACOT7LQ6ZUV0 252 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 AHSA2Q719I0 299 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 C9orf40Q8IXQ3 194 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 BOD1L2Q8IYS8 172 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 PUSL1Q8N0Z8 303 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 OR2A1Q8NGT9 310 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 OR4C6Q8NH72 309 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DOK4Q8TEW6 326 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 FRAT1Q92837 279 aaPredicted RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 S100PBPQ96BU1 408 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 PPP1R14BQ96C90 147 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RCN3Q96D15 328 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CMTM7Q96FZ5 175 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ZNF75AQ96N20 296 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 OR5B12Q96R08 314 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 HIST1H4GQ99525 98 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 TSNAXQ99598 290 aaKnown RBP2.51□□□□□ -2.01
UBR3-211ENST00000487689 GABRG3Q99928 467 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 C9orf16Q9BUW7 83 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ZNF426Q9BUY5 554 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 HES7Q9BYE0 225 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SRXN1Q9BYN0 137 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CHIAQ9BZP6 476 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ACTR6Q9GZN1 396 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 TIGARQ9NQ88 270 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 ZNF446Q9NWS9 450 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 SDHAF2Q9NX18 166 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 IMPAD1Q9NX62 359 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 CD274Q9NZQ7 290 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 DUX4Q9UBX2 424 aa2.51□□□□□ -2.01
UBR3-211ENST00000487689 APOBEC3BQ9UH17 382 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms