RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RPS6KA6Q9UK32 745 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 B9D1Q9UPM9 204 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 SIGLEC7Q9Y286 467 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 POLR1DQ9Y2S0 133 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 CAB39Q9Y376 341 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM96BQ9Y3D0 163 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 LSM4Q9Y4Z0 139 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IER3IP1Q9Y5U9 82 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 KPTNQ9Y664 436 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 LHFPL6Q9Y693 200 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
SNRNP40-205ENST00000486941 IGLV1-36A0A0B4J1U3 117 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A0U1RQK1 487 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF816-ZNF321PA0A0X1KG74 233 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 LOC100653049A0A140TA62 436 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1B0GVI7 797 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 A0A1W2PRQ8 180 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 BTBD17A6NE02 478 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CD300LBA8K4G0 201 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 M0R135 149 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 DCTN6O00399 190 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CXCR6O00574 342 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 DVL1O14640 695 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 IDH3BO43837 385 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OR10H3O60404 316 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 FCN3O75636 299 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 KRT34O76011 436 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF682O95780 498 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 RENP00797 406 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 GYPAP02724 150 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 FBP1P09467 338 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 MUC1P15941 1255 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CA6P23280 308 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 EEF1B2P24534 225 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 GGT2P36268 569 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OMPP47874 163 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 FXYD6P3P58550 94 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 DSCR10P59022 87 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 TRAP1Q12931 704 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 DGCR6Q14129 220 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 HERPUD1Q15011 391 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OR8B8Q15620 311 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 MEP1BQ16820 701 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 RFX4Q33E94 735 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 TEX36Q5VZQ5 186 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 DHRS7BQ6IAN0 325 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 FAM53AQ6NSI3 398 aaPredicted RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 C11orf88Q6PI97 169 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 SMARCD3Q6STE5 483 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CFAP77Q6ZQR2 320 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 C1orf122Q6ZSJ8 110 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 MRPL21Q7Z2W9 205 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 VMO1Q7Z5L0 202 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ARPINQ7Z6K5 226 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CYP4Z1Q86W10 505 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 GCSAMQ8N6F7 178 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 LY6G5BQ8NDX9 201 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC26A10Q8NG04 563 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OR2AJ1Q8NGZ0 328 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 OTULINQ96BN8 352 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF799Q96GE5 643 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 RSRC1Q96IZ7 334 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 TSSK2Q96PF2 358 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 PITX2Q99697 317 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 RNPEPL1Q9HAU8 725 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 SAR1AQ9NR31 198 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 C1orf123Q9NWV4 160 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 CMTM6Q9NX76 183 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 MRPL15Q9P015 296 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNRD1Q9P1U0 126 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 RPUSD1Q9UJJ7 312 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 AURKCQ9UQB9 309 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ENPP4Q9Y6X5 453 aa3.2□□□□□ -1.9
SNRNP40-205ENST00000486941 ANKRD61A6NGH8 418 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 GGT3PA6NGU5 568 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 A6NLC8 198 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 HMGB1P1B2RPK0 211 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 RNASEK-C17orf49H0YIS7 233 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 BHLHE40O14503 412 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 NDUFAB1O14561 156 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 NPFFO15130 113 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC22A2O15244 555 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 NDUFB3O43676 98 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SERPINA1P01009 418 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OPN1MWP04001 364 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 H1F0P07305 194 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OPN1MW2P0DN77 364 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OPN1MW3P0DN78 364 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 TROVE2P10155 538 aaKnown RBP eCLIP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 HIST1H1CP16403 213 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 ZNF823P16415 610 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC6A6P31641 620 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 OTX1P32242 354 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 DDOSTP39656 456 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 NAA10P41227 235 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 KIR2DS4P43632 304 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 TGM4P49221 684 aa3.19□□□□□ -1.9
SNRNP40-205ENST00000486941 SLC7A2P52569 658 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms