RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	CLDN12	P56749	244 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	ERVK11-1	P61568	191 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	BTG1	P62324	171 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	METAP1D	Q6UB28	335 aa	Predicted RBP	10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	LYPD2	Q6UXB3	125 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	USP43	Q70EL4	1123 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	LRRC28	Q86X40	367 aa	Predicted RBP	10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	FAM90A1	Q86YD7	464 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	SAXO1	Q8IYX7	474 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	PXT1	Q8NFP0	134 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	OR6M1	Q8NGM8	313 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	NDNF	Q8TB73	568 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	RAB1C	Q92928	201 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	BCL7B	Q9BQE9	202 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	NRIP2	Q9BQI9	281 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	TMEM246	Q9BRR3	403 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	REG4	Q9BYZ8	158 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	DCSTAMP	Q9H295	470 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	RBFOX1	Q9NWB1	397 aa	Known RBP	10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	STEAP1	Q9UHE8	339 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	PPIAL4A	Q9Y536	164 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	DOCK11	Q5JSL3	2073 aa		10.62	□□□□□ -0.71
HDAC7-223	ENST00000485796	TLN2	Q9Y4G6	2542 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	CELSR1	Q9NYQ6	3014 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796		A0A1W2PP11	408 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	IFITM5	A6NNB3	132 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	LGALS8	O00214	317 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	NDUFS8	O00217	210 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SMAD7	O15105	426 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SLC22A1	O15245	554 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	NOS1AP	O75052	506 aa	Predicted RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	FCN3	O75636	299 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	IL1A	P01583	271 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	GYPA	P02724	150 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	CSTB	P04080	98 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SFTPB	P07988	381 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	ACAA1	P09110	424 aa	Predicted RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	CD37	P11049	281 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SLC2A2	P11168	524 aa	Predicted RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	PRKACA	P17612	351 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SERPINA2	P20848	420 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SNU13	P55769	128 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	LMO4	P61968	165 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SPCS2	Q15005	226 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	SLC22A6	Q4U2R8	563 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	IDNK	Q5T6J7	187 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	ASCL4	Q6XD76	172 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	ACP7	Q6ZNF0	438 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	FAM58A	Q8N1B3	248 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	FGFRL1	Q8N441	504 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	CLDND2	Q8NHS1	167 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	EMG1	Q92979	244 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	C12orf43	Q96C57	262 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	KCNK15	Q9H427	330 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	RASL12	Q9NYN1	266 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	RSL24D1	Q9UHA3	163 aa	Known RBP	10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	DAPK2	Q9UIK4	370 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796	METRN	Q9UJH8	293 aa		10.61	□□□□□ -0.71
HDAC7-223	ENST00000485796		A0A0B4J203	849 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	TRAV38-1	A0A0B4J264	116 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SMIM31	A0A1B0GVY4	71 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	OOEP	A6NGQ2	149 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	CEACAM18	A8MTB9	384 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796		H3BMQ9	156 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	AIP	O00170	330 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SELL	P14151	372 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SLC25A16	P16260	332 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	CEBPD	P49716	269 aa	Predicted RBP	10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SEC61A1	P61619	476 aa	Known RBP	10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	GPR176	Q14439	515 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	MICB	Q29980	383 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SMIM21	Q3B7S5	101 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	ZNF404	Q494X3	552 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	TEX36	Q5VZQ5	186 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	FAM166A	Q6J272	317 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SFXN4	Q6P4A7	337 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796		Q8IYB0	196 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	OR51D1	Q8NGF3	324 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	TBC1D15	Q8TC07	691 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	SLC25A28	Q96A46	364 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	CYYR1	Q96J86	154 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	C1orf147	Q96MC9	270 aa	Predicted RBP	10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	CCL13	Q99616	98 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	RBM38	Q9H0Z9	239 aa	Known RBP	10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	BANF2	Q9H503	90 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	HES4	Q9HCC6	221 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	PCDHB16	Q9NRJ7	776 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	NDUFA13	Q9P0J0	144 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	NLK	Q9UBE8	527 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	OR14J1	Q9UGF5	321 aa		10.6	□□□□□ -0.71
HDAC7-223	ENST00000485796	MALRD1	Q5VYJ5	2156 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	F8	P00451	2351 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	CR1	P17927	2039 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	IGKV1D-17	A0A075B6S4	117 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	FAM157A	C9JC47	383 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	ZNF780A	O75290	641 aa	Predicted RBP	10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	CRTAP	O75718	401 aa	Predicted RBP	10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	BPNT1	O95861	308 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	UBB	P0CG47	229 aa		10.59	□□□□□ -0.71
HDAC7-223	ENST00000485796	PSG2	P11465	335 aa		10.59	□□□□□ -0.71

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