RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 PORCNQ9H237 461 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 KIR3DX1Q9H7L2 352 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 TMEM38BQ9NVV0 291 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 ENPP4Q9Y6X5 453 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 SBNO1A3KN83 1393 aa0.8□□□□□ -2.28
VPS50-216ENST00000484954 A0A0G2JMP0 313 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 A0A0X1KG70 313 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 A0A1W2PRF3 423 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 A0A1W2PRM7 423 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 CENPXA8MT69 81 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 K7EN84 100 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 MYL12BO14950 172 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ALOX12BO75342 701 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 DHRS3O75911 302 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ETHE1O95571 254 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 P0DMU3 169 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 FAM231AP0DMU4 169 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 FAM231CP0DMU5 169 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ZNF708P17019 499 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 PRKACAP17612 351 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 HLA-GP17693 338 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 CD9P21926 228 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 LGALS7P47929 136 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 RGS6P49758 472 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 RPL31P62899 125 aaKnown RBP0.79□□□□□ -2.28
VPS50-216ENST00000484954 SLC35B1P78383 322 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ATP5G2Q06055 141 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 LAMTOR4Q0VGL1 99 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ST3GAL4Q11206 333 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 DYNC1I2Q13409 638 aaKnown RBP0.79□□□□□ -2.28
VPS50-216ENST00000484954 NKAIN1Q4KMZ8 207 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 KCTD16Q68DU8 428 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 TMEM144Q7Z5S9 345 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 TMEM25Q86YD3 366 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 GAPTQ8N292 157 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 FBXO36Q8NEA4 188 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 OR51L1Q8NGJ5 315 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 OR2K2Q8NGT1 345 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 OR10Z1Q8NGY1 313 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 OR51A7Q8NH64 312 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 NT5CQ8TCD5 201 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ZFAND1Q8TCF1 268 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 FXYD5Q96DB9 178 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 MRPL48Q96GC5 212 aaKnown RBP0.79□□□□□ -2.28
VPS50-216ENST00000484954 Q96MT0 163 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ZNF75AQ96N20 296 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 DERL3Q96Q80 235 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 MAP1LC3CQ9BXW4 147 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ASB7Q9H672 318 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 ARMC7Q9H6L4 198 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 KLF13Q9Y2Y9 288 aaPredicted RBP0.79□□□□□ -2.28
VPS50-216ENST00000484954 CHTOPQ9Y3Y2 248 aaKnown RBP0.79□□□□□ -2.28
VPS50-216ENST00000484954 ORC6Q9Y5N6 252 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 KMT2EQ8IZD2 1858 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 SSH2Q76I76 1423 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 DOCK10Q96BY6 2186 aa0.79□□□□□ -2.28
VPS50-216ENST00000484954 NUP205Q92621 2012 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 TRAV8-7A0A075B6U6 113 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 FAM240AA0A1B0GVK7 77 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 A0A1W2PPV4 95 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 MYBPHLA2RUH7 354 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 GOLGA8JA6NMD2 632 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 H3BQ85 93 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ISLRO14498 428 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 FFAR1O14842 300 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ENTPD6O75354 484 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 CDS2O95674 445 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 OR5AL1P0C617 328 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 OR4Q2P0C623 313 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 GOLGA8HP0CJ92 632 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 CGB3P0DN86 165 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 CGB7P0DN87 165 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 MSR1P21757 451 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 SLC6A1P30531 599 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 MTPNP58546 118 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 TOMM34Q15785 309 aaPredicted RBP0.78□□□□□ -2.28
VPS50-216ENST00000484954 TAL2Q16559 108 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ATP6V1FQ16864 119 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 CEACAM16Q2WEN9 425 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ZNF404Q494X3 552 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 TTC32Q5I0X7 151 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 CLLU1OSQ5K130 101 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 MRPL2Q5T653 305 aaKnown RBP0.78□□□□□ -2.28
VPS50-216ENST00000484954 FAM27D1Q5T7N8 215 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 TRMT10CQ7L0Y3 403 aaKnown RBP0.78□□□□□ -2.28
VPS50-216ENST00000484954 FAM19A1Q7Z5A9 133 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 LYPD6Q86Y78 171 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ITPRIPQ8IWB1 547 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ZDHHC22Q8N966 263 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 OR5T3Q8NGG3 340 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 OR5H2Q8NGV7 314 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 NDNFQ8TB73 568 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ORAOV1Q8WV07 137 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 ING5Q8WYH8 240 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.78□□□□□ -2.28
VPS50-216ENST00000484954 OR5P3Q8WZ94 311 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 RNF170Q96K19 258 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 TSNAXQ99598 290 aaKnown RBP0.78□□□□□ -2.28
VPS50-216ENST00000484954 HIGD2AQ9BW72 106 aa0.78□□□□□ -2.28
VPS50-216ENST00000484954 COA1Q9GZY4 146 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms